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PLM4_65_b1_redo_sep16_scaffold_10254_6

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(2916..3797)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Plesiocystis pacifica SIR-1 RepID=A6G2A0_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 29.3
  • Coverage: 198.0
  • Bit_score: 72
  • Evalue 7.70e-10
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.3
  • Coverage: 198.0
  • Bit_score: 72
  • Evalue 1.10e-09
transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 31.2
  • Coverage: 208.0
  • Bit_score: 62
  • Evalue 1.70e-07

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Taxonomy

Plesiocystis pacifica → Plesiocystis → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
GTGAAGAGCGTTACCGCGGGGCCGGGGGGGACCCCTCCCGTATCGCTTTTCGTGCCTGCGGCGCGGGCGTCCTTCCTCCGGAGCGCCCGGCCCCAGGACACCCTGGCCAGTTTGACCGGCCTGGACCTCCGGCCTTCCCGACCGTGGCAGCCCAGCGGCCAGGGAGGAGCCCCATCGGCGAGCAAGCCCAGCCCGGGAGGCGGCCAGCCGCTGGAGCTCTCGGCCACCGACGCCGCCGACGTTCATCGGTTCGTGGCGCGACGCGTGGCCAACGCCGCGGACGCGGAAGACATCGCGCAGCAGACCCTGCTGCAGGCCTGCGCGAAGCTCCGCACCTGTCGCGGTGAGAGCCACCGGGCGTGGCTCTTCACGATCGCCCGCCACCTGGTCGTCGATCACTACCGCGCGAAGGGCCGGGTCCGGTTCGTGGAAGCGGCGGCGCGCTCGGAAACGGAGCCGGCGCTGCAGACCCACCCCGACGCGGTGCCCACCGCAGCGGGGAGCCGTGAACGGCTGGCTTGCCTGTCGCGCTGCGTCACCCGGCGCCTCTCTCTCGAGCAGCAGGTCGCGGTGCTCCTGGCCGACGTCCACGGCCACCGCGACAAGGACTCGGCGGCGGCGCTCCACATGAGCTTGCCCTGCTTCAAGCTGCTGCTTCACGGGGCACGAGCCCGCCTGCAGGCGACGGCTGGAGGAAGCTGCATGCTGGTGATGAAGAAGAGCACCGCGACCTGCGACGAGCGCGCCAACCCTGACAACAGGGCGAGCTCCGGGTCCGCCGGCGACGACCCGCCTCCTCGGGGCGTGGGCGTCACCTGCCGTCTCGGTGCCGCCAGTCTCCTCGCCCTGCGTGCCGAGCTGCAGGAGGGCCTGAATCTGTGA
PROTEIN sequence
Length: 294
VKSVTAGPGGTPPVSLFVPAARASFLRSARPQDTLASLTGLDLRPSRPWQPSGQGGAPSASKPSPGGGQPLELSATDAADVHRFVARRVANAADAEDIAQQTLLQACAKLRTCRGESHRAWLFTIARHLVVDHYRAKGRVRFVEAAARSETEPALQTHPDAVPTAAGSRERLACLSRCVTRRLSLEQQVAVLLADVHGHRDKDSAAALHMSLPCFKLLLHGARARLQATAGGSCMLVMKKSTATCDERANPDNRASSGSAGDDPPPRGVGVTCRLGAASLLALRAELQEGLNL*