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PLM4_65_b1_redo_sep16_scaffold_11990_3

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(1165..1755)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein IclR Tax=Frankia sp. CN3 RepID=G6H1P4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 189.0
  • Bit_score: 196
  • Evalue 2.40e-47
Transcriptional regulator ArsR family {ECO:0000313|EMBL:EYR79824.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 192.0
  • Bit_score: 202
  • Evalue 3.50e-49
regulatory protein ArsR similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 189.0
  • Bit_score: 193
  • Evalue 5.70e-47

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGGACAACGGGATCGACGTGATCTCGAGCCCGGGGCGGGCGGCAATGATGCTCGACCCGCTTCGGCTGCGCCTGCTCGAGGGGCTTCGCGAGCCCGATTCGGCCGCCGGACTCGCCCGCCGGCTGCGACTGCCCCGCCAGCGGGTGAACTACCACCTGCGCGAGCTCGAGAAGCAGCGGCTCGTCGAGCTCGTGGGCCGCAAGCGCCGGGGCAACTGCACGGCGCGCATCTTGCGCGCGACGGCACGCGCGTACGTGATCAGTCCGGCGGCGCTCGGCGGCATCGGCGCCGACCCCGCGGCGGTGAAGGACCGCTTCTCGGCCGCCTACCTGCTGGCCGTCACGTCGCGGACGCTGCGCGACGTGGGCGAGCTCGACGAGCGCGCTCAGAAGGCCGGCAAGCGGCTCGCGACACTCACGCTCGAGACCGAGGTGCGCTTCGCGTCCGCCGAGGCGCGCGCGGCCTTCGCGGAGGAGCTTACGAGTGCGGTCGCGCGGCTCACCGTCCAGTACCACGACGCCCAGTCTCCCGCGGGGCGCTCGTTCCGATTCGTGGTTGCCGGCCACCCGGCGACTGAACCCCAGGAGTGA
PROTEIN sequence
Length: 197
MDNGIDVISSPGRAAMMLDPLRLRLLEGLREPDSAAGLARRLRLPRQRVNYHLRELEKQRLVELVGRKRRGNCTARILRATARAYVISPAALGGIGADPAAVKDRFSAAYLLAVTSRTLRDVGELDERAQKAGKRLATLTLETEVRFASAEARAAFAEELTSAVARLTVQYHDAQSPAGRSFRFVVAGHPATEPQE*