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PLM4_65_b1_redo_sep16_scaffold_51024_3

Organism: PLM4_65_b1_sep16_Acidobacteria_71_15

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 13 / 38
Location: comp(1119..1781)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 206.0
  • Bit_score: 161
  • Evalue 7.20e-37
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 216.0
  • Bit_score: 146
  • Evalue 8.90e-33
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 189.0
  • Bit_score: 164
  • Evalue 1.20e-37

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Taxonomy

R_Acidobacteria_67_21 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 663
GTGTCCAAGTTCTTCGAGCACAGGGGGGCGACCGTGGGCACGGGTGAGCTGTCGCTCGGGGCGAGGTCGATCCCGGGGGTCGTGCCCGAGGGCGAGCTCGTCGCCTCCTGCCGGACGGGGGACCCCGAGGCTTTCGCGCGGCTCGTGCGGCTGCACGAGGGCATGGTGGTGAGCCTCGCGGCGCGCCTGCTCGGCGAGGTCGAGGAGGCCCGCGACGTGGCGCAGGAGGTGTTCCTGCAGGTGTACAAGAGGCTAGGCGCCTTCGAGGGCCGAAGCAGCCTCAGGACCTGGATCTACAGGATCGCGATCAACCAGTGCCACAACCGCCGGCGGTTCTGGCACAGGCGGCGACGCGACCGCGAGCGGCCGCTCGACGATGCCATCCTCGCACCCGCCTTGCCGGGCGCGGGAGGTCACGGCGCGAGCCCCTACGAAGAGACGCTGCGTCACGAGCGGGCGCAACGGGTCCAGGCGGCGCTGCTGGAGCTGCGCTTCGAGCACCGCAGCGTGCTGGTGCTGCGCGAGGTGGAGGGGCTCACGTGCGAAGAGGTGGCGGCGGCGCTCGACGTGCCCGAGGGCACGGTCAAGAGCCGCCTGTCACGGGCGCGCGAGGCCATGCGGCGCAAGCTCGCGGGGCTCATCGAGGAAGAGGTGCGGTCATGA
PROTEIN sequence
Length: 221
VSKFFEHRGATVGTGELSLGARSIPGVVPEGELVASCRTGDPEAFARLVRLHEGMVVSLAARLLGEVEEARDVAQEVFLQVYKRLGAFEGRSSLRTWIYRIAINQCHNRRRFWHRRRRDRERPLDDAILAPALPGAGGHGASPYEETLRHERAQRVQAALLELRFEHRSVLVLREVEGLTCEEVAAALDVPEGTVKSRLSRAREAMRRKLAGLIEEEVRS*