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PLM4_65_b1_sep16_Acidobacteria_71_15

PLM4_65cm_b1_redo_sep2016_Acidobacteria_71_15
In projects: PLM4_65cm_b1_redo_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p  |  Acidobacteria_All

Consensus taxonomy: Acidobacteria  →  Bacteria

Displaying items 1-50 of 402 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM4_65_b1_redo_sep16_scaffold_111195
Species: RBG_16_Acidobacteria_70_10_curated (50%)
4 2537 bp 73.63 16.02 99.57
PLM4_65_b1_redo_sep16_scaffold_110810
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)
2 2542 bp 68.06 12.92 99.13
PLM4_65_b1_redo_sep16_scaffold_110732
Domain: Bacteria (75%)
4 2543 bp 69.48 15.04 96.26
PLM4_65_b1_redo_sep16_scaffold_109754
Species: R_Acidobacteria_68_18 (50%)
2 2556 bp 64.55 11.62 99.06
PLM4_65_b1_redo_sep16_scaffold_161159
Species: Geobacter sp. OR-1 (50%)
2 2638 bp 72.93 11.60 97.01
PLM4_65_b1_redo_sep16_scaffold_103050
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (100%)
2 2656 bp 70.14 10.39 85.62
PLM4_65_b1_redo_sep16_scaffold_241278
Species: RBG_16_Acidobacteria_70_10_curated (80%)
5 2667 bp 66.37 18.28 82.00
PLM4_65_b1_redo_sep16_scaffold_100512
Species: Candidatus Solibacter usitatus (100%)
2 2697 bp 66.33 11.23 84.65
PLM4_65_b1_redo_sep16_scaffold_98292
Domain: Bacteria (66.67%)
3 2732 bp 74.38 12.19 98.94
PLM4_65_b1_redo_sep16_scaffold_97459
Species: RBG_16_Acidobacteria_70_10_curated (50%)
4 2746 bp 69.37 11.91 94.72
PLM4_65_b1_redo_sep16_scaffold_96854
Species: Candidatus Solibacter usitatus (50%)
2 2756 bp 70.86 11.59 99.49
PLM4_65_b1_redo_sep16_scaffold_130708
Phylum: Gemmatimonadetes (66.67%)
3 2758 bp 72.12 13.98 90.72
PLM4_65_b1_redo_sep16_scaffold_93926
Domain: Bacteria (80%)
5 2806 bp 70.85 13.63 91.30
PLM4_65_b1_redo_sep16_scaffold_93487
Domain: Bacteria (100%)
3 2813 bp 70.67 16.37 92.89
PLM4_65_b1_redo_sep16_scaffold_92930
Phylum: Acidobacteria (66.67%)
3 2823 bp 70.24 14.51 93.41
PLM4_65_b1_redo_sep16_scaffold_92374
Species: RBG_16_Acidobacteria_70_10_curated (50%)
2 2833 bp 69.61 17.63 98.27
PLM4_65_b1_redo_sep16_scaffold_89651
Domain: Bacteria (50%)
4 2885 bp 68.67 11.28 89.01
PLM4_65_b1_redo_sep16_scaffold_84928
Species: RBG_16_Acidobacteria_70_10_curated (100%)
3 2980 bp 69.19 14.40 88.99
PLM4_65_b1_redo_sep16_scaffold_84390
Species: Actinoplanes sp. N902-109 (50%)
2 2992 bp 71.22 12.48 99.37
PLM4_65_b1_redo_sep16_scaffold_82469
Species: RBG_13_OP8X_37_8_curated (100%)
2 3033 bp 69.73 9.69 100.10
PLM4_65_b1_redo_sep16_scaffold_81333
Phylum: Acidobacteria (100%)
3 3058 bp 68.97 14.37 91.33
PLM4_65_b1_redo_sep16_scaffold_79070
Species: RBG_16_Acidobacteria_70_10_curated (100%)
3 3110 bp 68.26 15.77 96.85
PLM4_65_b1_redo_sep16_scaffold_77368
Species: Rhodanobacter spathiphylli (66.67%)
3 3151 bp 70.96 16.95 99.97
PLM4_65_b1_redo_sep16_scaffold_74825
Species: RBG_16_Acidobacteria_70_10_curated (71.43%)
7 3212 bp 67.65 16.30 94.15
PLM4_65_b1_redo_sep16_scaffold_91244
Species: RBG_16_Acidobacteria_70_10_curated (50%)
4 3223 bp 71.21 15.64 89.08
PLM4_65_b1_redo_sep16_scaffold_74267
Species: RBG_16_Acidobacteria_70_10_curated (66.67%)
3 3226 bp 69.47 14.83 90.86
PLM4_65_b1_redo_sep16_scaffold_72175
Species: Rhodanobacter spathiphylli (50%)
4 3280 bp 69.76 16.46 95.03
PLM4_65_b1_redo_sep16_scaffold_71377
Species: RBG_16_Acidobacteria_70_10_curated (50%)
4 3302 bp 74.14 11.86 93.58
PLM4_65_b1_redo_sep16_scaffold_71340
Species: R_Acidobacteria_65_29 (50%)
4 3304 bp 71.52 14.39 90.35
PLM4_65_b1_redo_sep16_scaffold_71067
Phylum: Acidobacteria (66.67%)
3 3310 bp 69.31 11.24 65.53
PLM4_65_b1_redo_sep16_scaffold_70727 3 3320 bp 72.89 9.58 98.58
PLM4_65_b1_redo_sep16_scaffold_70527
Domain: Bacteria (75%)
4 3325 bp 70.98 16.47 81.20
PLM4_65_b1_redo_sep16_scaffold_69760
Species: RBG_16_Acidobacteria_70_10_curated (60%)
5 3348 bp 69.80 16.85 97.94
PLM4_65_b1_redo_sep16_scaffold_69443
Species: RBG_19FT_COMBO_Chloroflexi_55_16_curated (50%)
2 3357 bp 72.62 12.24 95.08
PLM4_65_b1_redo_sep16_scaffold_68694
Species: RBG_16_Acidobacteria_70_10_curated (66.67%)
3 3378 bp 70.22 15.94 99.82
PLM4_65_b1_redo_sep16_scaffold_68667
Species: Candidatus Solibacter usitatus (50%)
2 3379 bp 72.65 14.52 97.13
PLM4_65_b1_redo_sep16_scaffold_68510
Phylum: Acidobacteria (80%)
5 3383 bp 68.96 15.08 100.30
PLM4_65_b1_redo_sep16_scaffold_64783
Species: RBG_19FT_COMBO_Aminicenantes_58_17_curated (50%)
2 3494 bp 71.92 10.69 99.69
PLM4_65_b1_redo_sep16_scaffold_64731
Phylum: Proteobacteria (66.67%)
3 3496 bp 75.03 11.76 100.14
PLM4_65_b1_redo_sep16_scaffold_64281
Domain: Bacteria (100%)
5 3510 bp 69.15 16.79 91.03
PLM4_65_b1_redo_sep16_scaffold_63991
Species: RBG_16_Acidobacteria_70_10_curated (100%)
2 3520 bp 66.28 21.01 99.72
PLM4_65_b1_redo_sep16_scaffold_63172
Phylum: Acidobacteria (100%)
3 3545 bp 72.02 10.75 99.18
PLM4_65_b1_redo_sep16_scaffold_78679
Species: RBG_16_Acidobacteria_70_10_curated (50%)
6 3554 bp 68.06 18.19 75.13
PLM4_65_b1_redo_sep16_scaffold_62593
Species: RBG_16_Acidobacteria_70_10_curated (66.67%)
3 3565 bp 69.71 16.45 95.68
PLM4_65_b1_redo_sep16_scaffold_62123
Species: RBG_16_Acidobacteria_70_10_curated (100%)
3 3580 bp 70.42 10.18 100.22
PLM4_65_b1_redo_sep16_scaffold_62004
Domain: Bacteria (75%)
4 3583 bp 70.95 15.78 89.84
PLM4_65_b1_redo_sep16_scaffold_61888
Species: R_Acidobacteria_67_28 (50%)
4 3587 bp 71.62 10.87 95.68
PLM4_65_b1_redo_sep16_scaffold_61368
Species: RBG_16_Acidobacteria_70_10_curated (50%)
4 3604 bp 70.89 12.65 97.64
PLM4_65_b1_redo_sep16_scaffold_60884
Domain: Bacteria (75%)
4 3620 bp 70.58 9.78 95.30
PLM4_65_b1_redo_sep16_scaffold_73417
Phylum: Acidobacteria (50%)
4 3656 bp 69.12 14.36 96.50
Displaying items 1-50 of 402 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.