ggKbase home page

PLM3-1_170_b1_sep16_scaffold_1220_12

Organism: PLM6_170_b1_sep16_Methylomirabilis_oxyfera_63_39

near complete RP 44 / 55 BSCG 46 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 13350..14288

Top 3 Functional Annotations

Value Algorithm Source
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (EC:4.1.1.68) bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 272.0
  • Bit_score: 345
  • Evalue 3.80e-92
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10) similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 315.0
  • Bit_score: 293
  • Evalue 3.80e-77
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 272.0
  • Bit_score: 345
  • Evalue 5.40e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Armatimonadetes_69_19_curated → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 939
ATGCAACTGGTCACCGTGCTCTGGGATCGGCGGCCGACACTCGCCGCCGCCGTCAGCGATCATGTCCTGAACCTGCCGGCCTGTGCCGGGCCGCTGAAGCGGTCGGGGCAATGGACGGGCGGGGTGCCGCGCGATATGCTCGAACTGATCTCGGGCGGGCCGTCTGCGCTGAGGGCGGTGCAGGGTGTTTTTCGGGAGAGCATCCGGCGTCTCAGGGGTGGGTCGTGGCGGGCGGCGGCGCGCGATCCACGCGTCCGCCCCATCGACGGGGTCCGGTTTCTCGCCCCGATTCCGCGTCCGACGAAGAATGTCTTCTGCATGGGCCGCAACTACGCGGAGCACGCCCGCGAGCAGCAGGCCGAAGTCCCTGAGGTTCCGGTCTTCTTCACCAAGGCCCCGACCTGTGTCATCGGTCACGAGGCGCCCGTGATTTACCATCCCGTGACGATGAACCTTGACTATGAAGTCGAGCTCGCGGTCGTGATCGGCAGGAGGGGTATCAATATCCCGCGAGGAAAGGCGTACGACTACGTGTTCGGCTACACGATCCTGATTGATGTCACGGCGAGAGATCTACAAAAGAAACATTTGCAGTGGTTCAAGGGGAAGAGCCTCGACACCTTCTGCCCGATGGGGCCTTGGATCGTGCACAAATCGGCGATCCCGGATCCGCATAAACTCCAGATCAGCCTGCGTGTCAACGGGGAGGTCCGCCAGTCCGCCAATACCGGTATCATGGTTTTCAAGATCCCGGAGCTGATCGAGGTGCTGTCGGCCGGCATGACGCTCGAGCCGGGGGACATCCTGGCCACCGGCACCCCCTCCGGCGTCGCGGCGGGCTTCGATCCGCCGAAGTGGCTTCAGATCGGCGACGTGATCGAGGCCGAGATCGAAGGGATCGGGGTGCTCCGGAACCGGGTCGTCGCCCCGCGATCCTGA
PROTEIN sequence
Length: 313
MQLVTVLWDRRPTLAAAVSDHVLNLPACAGPLKRSGQWTGGVPRDMLELISGGPSALRAVQGVFRESIRRLRGGSWRAAARDPRVRPIDGVRFLAPIPRPTKNVFCMGRNYAEHAREQQAEVPEVPVFFTKAPTCVIGHEAPVIYHPVTMNLDYEVELAVVIGRRGINIPRGKAYDYVFGYTILIDVTARDLQKKHLQWFKGKSLDTFCPMGPWIVHKSAIPDPHKLQISLRVNGEVRQSANTGIMVFKIPELIEVLSAGMTLEPGDILATGTPSGVAAGFDPPKWLQIGDVIEAEIEGIGVLRNRVVAPRS*