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PLM6_170_b1_sep16_Methylomirabilis_oxyfera_63_39

PLM3-1_170cm_b1_sep2016_CSP1_5_NC10_63_39
In projects: PLM3-1_170cm_b1_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: CSP1_5_NC10  →  NC10  →  Bacteria

Displaying items 1-50 of 175 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3-1_170_b1_sep16_scaffold_67671
Species: CSP1_5_NC10 (100%)
2 2553 bp 64.39 31.02 96.24
PLM3-1_170_b1_sep16_scaffold_28483
Species: CSP1_5_NC10 (100%)
3 2585 bp 65.26 36.73 69.28
PLM3-1_170_b1_sep16_scaffold_72345
Species: CSP1_5_NC10 (75%)
4 2598 bp 62.20 36.61 68.48
PLM3-1_170_b1_sep16_scaffold_27930
Species: CSP1_5_NC10 (100%)
4 2613 bp 61.19 34.21 92.65
PLM3-1_170_b1_sep16_scaffold_27687
Species: CSP1_5_NC10 (100%)
3 2626 bp 62.34 35.19 83.05
PLM3-1_170_b1_sep16_scaffold_26963
Species: CSP1_5_NC10 (100%)
5 2665 bp 64.09 40.02 94.22
PLM3-1_170_b1_sep16_scaffold_26643
Species: CSP1_5_NC10 (100%)
4 2683 bp 62.43 30.30 86.21
PLM3-1_170_b1_sep16_scaffold_42344
Species: CSP1_5_NC10 (100%)
2 2698 bp 65.16 31.91 75.17
PLM3-1_170_b1_sep16_scaffold_64869
Species: CSP1_5_NC10 (100%)
2 2740 bp 64.01 35.42 90.33
PLM3-1_170_b1_sep16_scaffold_25568
Species: CSP1_5_NC10 (100%)
4 2743 bp 64.60 31.28 98.87
PLM3-1_170_b1_sep16_scaffold_25062
Species: CSP1_5_NC10 (50%)
4 2776 bp 61.06 29.39 97.15
PLM3-1_170_b1_sep16_scaffold_24943
Species: CSP1_5_NC10 (100%)
5 2782 bp 62.58 43.89 92.09
PLM3-1_170_b1_sep16_scaffold_24236
Species: CSP1_5_NC10 (100%)
2 2825 bp 65.91 32.44 98.02
PLM3-1_170_b1_sep16_scaffold_31504
Species: CSP1_5_NC10 (100%)
4 2838 bp 61.91 39.38 70.51
PLM3-1_170_b1_sep16_scaffold_23656
Species: Candidatus Methylomirabilis oxyfera (60%)
5 2865 bp 63.53 39.27 95.81
PLM3-1_170_b1_sep16_scaffold_23529
Species: CSP1_5_NC10 (66.67%)
3 2874 bp 59.50 27.19 89.14
PLM3-1_170_b1_sep16_scaffold_23486
Species: CSP1_5_NC10 (100%)
3 2877 bp 61.38 38.37 91.97
PLM3-1_170_b1_sep16_scaffold_34133
Species: CSP1_5_NC10 (100%)
3 2896 bp 60.15 26.52 89.19
PLM3-1_170_b1_sep16_scaffold_60152
Species: CSP1_5_NC10 (80%)
5 2912 bp 63.22 25.39 96.53
PLM3-1_170_b1_sep16_scaffold_22567
Species: CSP1_5_NC10 (100%)
2 2943 bp 63.40 36.80 89.70
PLM3-1_170_b1_sep16_scaffold_22102
Species: CSP1_5_NC10 (100%)
3 2978 bp 65.25 33.09 77.17
PLM3-1_170_b1_sep16_scaffold_21985
Species: CSP1_5_NC10 (80%)
5 2987 bp 62.44 31.94 88.99
PLM3-1_170_b1_sep16_scaffold_21763
Species: CSP1_5_NC10 (100%)
4 3004 bp 63.15 39.75 92.08
PLM3-1_170_b1_sep16_scaffold_21300
Species: CSP1_5_NC10 (100%)
2 3042 bp 65.65 30.82 98.92
PLM3-1_170_b1_sep16_scaffold_66656
Species: CSP1_5_NC10 (100%)
3 3093 bp 58.62 33.03 100.49
PLM3-1_170_b1_sep16_scaffold_28247
Species: CSP1_5_NC10 (80%)
5 3093 bp 63.89 33.85 80.12
PLM3-1_170_b1_sep16_scaffold_65223
Domain: Bacteria (75%)
4 3100 bp 59.13 34.98 89.32
PLM3-1_170_b1_sep16_scaffold_32344
Species: CSP1_5_NC10 (75%)
4 3131 bp 62.44 40.91 85.95
PLM3-1_170_b1_sep16_scaffold_19682
Species: CSP1_5_NC10 (66.67%)
3 3176 bp 63.35 24.42 96.63
PLM3-1_170_b1_sep16_scaffold_45234
Species: CSP1_5_NC10 (66.67%)
6 3177 bp 58.83 42.45 71.48
PLM3-1_170_b1_sep16_scaffold_19641
Species: CSP1_5_NC10 (75%)
4 3180 bp 56.60 39.25 97.92
PLM3-1_170_b1_sep16_scaffold_19561
Species: CSP1_5_NC10 (100%)
4 3187 bp 63.01 42.78 87.17
PLM3-1_170_b1_sep16_scaffold_19408
Species: CSP1_5_NC10 (100%)
3 3200 bp 64.47 39.14 99.75
PLM3-1_170_b1_sep16_scaffold_25726
Species: CSP1_5_NC10 (66.67%)
3 3249 bp 64.33 41.27 95.84
PLM3-1_170_b1_sep16_scaffold_24913
Species: CSP1_5_NC10 (100%)
3 3279 bp 63.65 33.07 96.16
PLM3-1_170_b1_sep16_scaffold_18511
Species: CSP1_5_NC10 (100%)
3 3285 bp 62.86 33.38 91.51
PLM3-1_170_b1_sep16_scaffold_18334
Species: CSP1_5_NC10 (100%)
4 3302 bp 61.27 30.53 87.77
PLM3-1_170_b1_sep16_scaffold_52821
Species: CSP1_5_NC10 (66.67%)
3 3325 bp 61.68 37.44 75.52
PLM3-1_170_b1_sep16_scaffold_28494
Species: CSP1_5_NC10 (100%)
3 3335 bp 65.40 42.05 96.79
PLM3-1_170_b1_sep16_scaffold_30625
Species: CSP1_5_NC10 (100%)
3 3340 bp 63.95 30.72 99.16
PLM3-1_170_b1_sep16_scaffold_17684
Species: CSP1_5_NC10 (100%)
4 3369 bp 62.45 36.33 76.85
PLM3-1_170_b1_sep16_scaffold_17458
Species: CSP1_5_NC10 (100%)
5 3392 bp 64.24 32.90 89.86
PLM3-1_170_b1_sep16_scaffold_17363
Species: CSP1_5_NC10 (100%)
7 3402 bp 62.46 46.08 95.86
PLM3-1_170_b1_sep16_scaffold_35444
Domain: Bacteria (60%)
5 3417 bp 63.65 29.32 80.60
PLM3-1_170_b1_sep16_scaffold_16873
Species: CSP1_5_NC10 (100%)
4 3463 bp 63.67 35.22 93.39
PLM3-1_170_b1_sep16_scaffold_16679
Species: CSP1_5_NC10 (100%)
3 3487 bp 64.44 42.24 89.73
PLM3-1_170_b1_sep16_scaffold_28864
Species: CSP1_5_NC10 (75%)
8 3490 bp 61.20 36.06 88.22
PLM3-1_170_b1_sep16_scaffold_32747
Domain: Bacteria (71.43%)
7 3528 bp 62.59 33.33 67.01
PLM3-1_170_b1_sep16_scaffold_51268
Species: CSP1_5_NC10 (100%)
5 3633 bp 64.02 36.66 90.42
PLM3-1_170_b1_sep16_scaffold_15341
Species: CSP1_5_NC10 (100%)
4 3652 bp 64.27 38.53 90.44
Displaying items 1-50 of 175 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.