ggKbase home page

PLM3-1_170_b1_sep16_scaffold_17161_1

Organism: PLM6_170_b1_sep16_Deltaproteobacteria_56_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 3..371

Top 3 Functional Annotations

Value Algorithm Source
Two-component response regulator bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Lyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 122.0
  • Bit_score: 172
  • Evalue 1.70e-40
PAS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 116.0
  • Bit_score: 119
  • Evalue 5.00e-25
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 117.0
  • Bit_score: 174
  • Evalue 6.40e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
AGAATACTATTGGTGGAAGACAATCCTGGAACCATTGATGTGATGCGCCAGGAACTGGAAGTGCTCGGTTATGACGTTACCGTTGCAAAAAACGGCGTGGAGGCTGTGGAAATGGCCACCACGTTGCTTCCCGACCTGATTGTGATGGATATCATTATCCCCAAGATCGATGGGCTGCAGGCGGCCACCCAGATACGCCAAAATATCAAGACTCAAGCCATTCCCATATTGGCGGCTACTGCAATGGCCATGCCCGGAGATAGGGAGAAATGTTTGGCAGGCGGATGCGACGGGTACATTGCCAAGCCCTTTACCTACAGGGAGCTGGGCGCGGCTATTCAGAAGTTGTTGGACAAGCGGCCGCGATGA
PROTEIN sequence
Length: 123
RILLVEDNPGTIDVMRQELEVLGYDVTVAKNGVEAVEMATTLLPDLIVMDIIIPKIDGLQAATQIRQNIKTQAIPILAATAMAMPGDREKCLAGGCDGYIAKPFTYRELGAAIQKLLDKRPR*