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PLM3-1_170_b1_sep16_scaffold_19871_5

Organism: PLM6_170_b1_sep16_Deltaproteobacteria_56_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(2178..2744)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 189.0
  • Bit_score: 136
  • Evalue 2.80e-29
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 180.0
  • Bit_score: 131
  • Evalue 1.90e-28
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 183.0
  • Bit_score: 258
  • Evalue 4.00e-66

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Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGGCTACAGAGAGAAAGGGCGGCGCCGAGGAAAGGGAGGAAGTTGCTCGTCAAGCCATGGTTCATCTCGACCACCTATACCGGGTGGCCATCCACCTGGCCAAAGAATCGGATGAGGCTGGAGAGCTGGTGCAGGAGACGTACGCACGCGCCCTAAATTCCTATGAGCAGTTTACGCCCGGGACTAACATGAAGGCCTGGTTGACACGCATCCTCTATAATTTTTTTTTCGACCGGTATCATGAAAAGAAGCGATGGGTATTTGCAAAGGACAACAACCCACCGGAGGAGCAAGGTACCGACTACTGGGAAACTGCCGCGGACAACAATCCTGGACCTGAAGACTATATTTTGCGCAAGGAGCTGAACACGAAAATCACGGATGCGTTAAGGCAAATCCCGGAGGAGTTTCGCGCCCCTATCCTTCTGGTGGATATGGGCGATTTTTCCTATGCGGAAGCAGCCGAGATCCTCTCATGCCCTGTAGGCACCATCCGCTCCCGTCTTTCCCGCGCGCGGAGACTCCTGCACAAACAGCTTAAGGGGTATATAGGAAGAGGTCAGTAG
PROTEIN sequence
Length: 189
VATERKGGAEEREEVARQAMVHLDHLYRVAIHLAKESDEAGELVQETYARALNSYEQFTPGTNMKAWLTRILYNFFFDRYHEKKRWVFAKDNNPPEEQGTDYWETAADNNPGPEDYILRKELNTKITDALRQIPEEFRAPILLVDMGDFSYAEAAEILSCPVGTIRSRLSRARRLLHKQLKGYIGRGQ*