ggKbase home page

PLM3-1_170_b1_sep16_scaffold_39609_4

Organism: PLM6_170_b1_sep16_Deltaproteobacteria_56_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(2137..2601)

Top 3 Functional Annotations

Value Algorithm Source
Protease HtpX homolog bin=GWD2_Deltaproteobacteria_55_8 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 128.0
  • Bit_score: 205
  • Evalue 2.30e-50
Zn-dependent protease with chaperone function similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 134.0
  • Bit_score: 99
  • Evalue 5.10e-19
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 146.0
  • Bit_score: 227
  • Evalue 1.10e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGTCCGGCCCGGTAGCAAGCCATGCCCCGCAAGATTTTGCCGAGCGGCAGGCCCATAACCGCCGGATGGCCGCGTTGATCGTCCTTCTCTTTCTCATCTTTTTCTTTCTTGTCGGCCTTTCGGTAGATTATCTCTATCTCGATGCCTTTACTCCCGCAGGTCCCGCGTTTCCCTTGGCCACGGTCCTCTCTCTCAGCCTTGCCACGGGGATGACCTTGACTTCGTACTACGGGGGCAGCGAGCTGATTTTACGCTCGCTCGGGGCGGAGAGGTTGGACATCGAGCTTCCCGAACACCGAGAACTGCGCAACGTGGTAAAAGAGATGGCGCTCGCATCGGGATGCCCCATGCCTAAAGTTCACGTCGTTTTTGATCCCGCTCCCAATGCTCTGGCGACCGGGCGGGATCCGTCGAATGCGTCGGTCTGTGTCACCACAGNNNNNNNNNNNNNNNNNNNNNCATGA
PROTEIN sequence
Length: 155
MSGPVASHAPQDFAERQAHNRRMAALIVLLFLIFFFLVGLSVDYLYLDAFTPAGPAFPLATVLSLSLATGMTLTSYYGGSELILRSLGAERLDIELPEHRELRNVVKEMALASGCPMPKVHVVFDPAPNALATGRDPSNASVCVTTXXXXXXXX*