ggKbase home page

PLM3-1_170_b1_sep16_scaffold_1605_15

Organism: PLM6_170_b1_sep16_Chloroflexi_61_13

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(18043..18657)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 203.0
  • Bit_score: 241
  • Evalue 5.10e-61
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 201.0
  • Bit_score: 204
  • Evalue 2.00e-50
Tax=RBG_16_Chloroflexi_63_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 199.0
  • Bit_score: 289
  • Evalue 3.00e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_63_12_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 615
ATGGACGAAGCCGCTCTCATTGCCGCGGCCCGGCGCGGCGACTTGGACGCTTTCAACCGGCTGGTGCTGCACTACCAGACCCAAGTGTATAACCTCGCCTATCGCATCGTCGGCGAGCGAGAGGGGGCCTCGGACGCGACTCAAGAGGCTTTTATCTCGGCCTGGCGAAAGCTTGGCAGCTACCGGGGCGGGTCGTTTAAGGCCTGGCTGCTGCGGATCGTCACGAATGCTTGCTACGACGAGCTGCGCCGCCGCAAGAGGCGTCCGGCGGTCTCGCTCGAGGCCCTGATGGTCGAGAGCGCGGGGCCGGAGGCCGAAGCCGAGGCCGAATTCAAGAGCACTGCGGAAGGTCCGGAGACCTTCGTCCAGCGGCGCGAGCTGGCGCGGGTGCTGCAAGATTGCCTGGATCGTTTGCCGGACGAGATGCGCGTCATCACGGTCATGTCAGACGTGCACGGCTACAATTACGATGAGATTGCCGCTGCGACCGGCGTTGCTCTCGGGACCGTGAAGAGCCGCCTGTCACGGGCGCGCGCACGAATGCGGGAATGCCTGCAGGGGTTTCGGGAACTGTTGCCCGCCATGTATCGTCTAGGAGGGGAGACAGTCCTATGA
PROTEIN sequence
Length: 205
MDEAALIAAARRGDLDAFNRLVLHYQTQVYNLAYRIVGEREGASDATQEAFISAWRKLGSYRGGSFKAWLLRIVTNACYDELRRRKRRPAVSLEALMVESAGPEAEAEAEFKSTAEGPETFVQRRELARVLQDCLDRLPDEMRVITVMSDVHGYNYDEIAAATGVALGTVKSRLSRARARMRECLQGFRELLPAMYRLGGETVL*