ggKbase home page

PLM3-1_170_b1_sep16_scaffold_3501_7

Organism: PLM6_170_b1_sep16_Chloroflexi_61_13

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(5718..6947)

Top 3 Functional Annotations

Value Algorithm Source
potD; spermidine/putrescine ABC transporter; K11069 spermidine/putrescine transport system substrate-binding protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Rhizobium sp. AP16 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 382.0
  • Bit_score: 564
  • Evalue 6.90e-158
potD; spermidine/putrescine ABC transporter similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 332.0
  • Bit_score: 177
  • Evalue 5.10e-42
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 382.0
  • Bit_score: 564
  • Evalue 9.70e-158

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Armatimonadetes_69_19_curated → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1230
ATGGGGAAGCCGGGAACTCCGGACTTACCCCGCCCGATAGCCAGTCAGATGGAGGAGACTATGTGGACCAAAAGAAATCGCCGCTATTCCGCTACGGCGATGTTATTCGTGATCGCGCTGATTCTCTCTGCCTGCGGAGGCGCAACACCGACCACGGCGCCACCCCAACCTACCGCGCCGCCGCCCCAACCCACCGAGCCGCCCCAACCCACCCAGCCGCCACCGCCCACCGAGCCGCCGGAGCCCACCGCCGCCCCGGCCGAGCTGAGCGTTCTCGAGTGGGCTTTTTACGAAGTACCCGAAATGTGGGTCGAGTTCGGCGAGGCCCATCCGGAGGTCGAAGTGACCTTCAACTTCGGCGCCTCCAACCCGGATATCTATGCCAAGACATTGGCCGGCTCGGGCGAAGACATCGTCCACTTCTACACGCCCGACCTGCAGTTCTACGTGGACGAGGGCCTGATCCAGCCCATTGACACTTCCAAGATCACGCATTGGGACGAGATCCCCGCCGGCTTCCAGGAGTCCTGCACGATTGAGGGCGTGGTGTACTGCGTGCCGTGGGACTGGGGCTTCAGTTCGATCCTCTATCGCACGGACAAGGTCCCCGAAGGGATTGATTCGTGGGCTGCGATGTTCGACGAAAGGTACGCCGGCCACATTTCCATGTACGACGACGCGACCTCGGTTGTCCCGGTTACAGCCCACATGCTGGGCTACGACGAACGGAATCTGACCGACGAGCAACTGGAAGAGATCAAGCAACTCTGGATCGAGCAGCGCGATCTCAACTTGTTCTACTGGGTGGACGAGCCGACGCTGGAAGAGGGCTTTACGTCGGGCGACATCTGGCTGGCCTTCGCCTGGAACGGCGCGTACTACCGGTTGTTGAGCGCTGGCGTGCCGGTGGCCTACGCCGACCCCACGGAAGGCCGCGAGAGTTGGACCGGTCTATACGCCATCTCGGCCACGACCGAGAACTACGACCTGGCGCTGGAATTCCTCGATGGCAAATTGGGCGAACAAACGGCCACCCACCTGCTCGTGGATTACGCCTACGGCCACGTCAACCCCAGCTTTTACGAGGTGGTCGAGGATCCGAACCTAGTCGAAGCGCTGGCCCTGGACGACCCAAGTATCCTGGAACGCACTAACTTCACCGTGCCCATCTCGGCGGAGGAGCGCGACCGCTGGGTCCAGATGTGGGCCGAGGTCCAGGCGGCGCCGTAG
PROTEIN sequence
Length: 410
MGKPGTPDLPRPIASQMEETMWTKRNRRYSATAMLFVIALILSACGGATPTTAPPQPTAPPPQPTEPPQPTQPPPPTEPPEPTAAPAELSVLEWAFYEVPEMWVEFGEAHPEVEVTFNFGASNPDIYAKTLAGSGEDIVHFYTPDLQFYVDEGLIQPIDTSKITHWDEIPAGFQESCTIEGVVYCVPWDWGFSSILYRTDKVPEGIDSWAAMFDERYAGHISMYDDATSVVPVTAHMLGYDERNLTDEQLEEIKQLWIEQRDLNLFYWVDEPTLEEGFTSGDIWLAFAWNGAYYRLLSAGVPVAYADPTEGRESWTGLYAISATTENYDLALEFLDGKLGEQTATHLLVDYAYGHVNPSFYEVVEDPNLVEALALDDPSILERTNFTVPISAEERDRWVQMWAEVQAAP*