ggKbase home page

PLM3-1_170_b1_sep16_scaffold_3611_6

Organism: PLM6_170_b1_sep16_Chloroflexi_61_13

near complete RP 51 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(2300..3391)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2Q0_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 351.0
  • Bit_score: 368
  • Evalue 6.40e-99
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH81014.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 351.0
  • Bit_score: 368
  • Evalue 9.00e-99
rpoE; RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 346.0
  • Bit_score: 293
  • Evalue 4.40e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ktedonobacter racemifer → Ktedonobacter → Ktedonobacterales → Ktedonobacteria → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1092
ATGTCTAAAGCTAGTAGCCAGAATCCCACGCACGAGCGCATCCCGCTGCCCAACCCGGTCGAGGCCGAGCGCCTCTCTGCGGCTCGGCGCGGGGATACCCATGAATTTAGCGATTTAGCCGAGCCGTACCGCCGCGAGCTGCAGATTCACTGTTATCGCATCCTCGGCTCACTGCACGAAGCGGAAGACCTGGTGCAGGAAACGCTTCTGCGCGCCTGGCGGCGGCTCGATACGTACCAAGGCCGGGCGTCGTTCCGGGCTTGGCTCTACAAGATTGCTACGAACGCCTGCCTGGATGCCCTCGATCGAACGCGAAGCCAGCGCCCTCTTCCAACCCGATCCCATCCTGCTTCAGACCCGCGTGCCCCGATTTTGCCCCCCACCTCAGAGATAAGCTGGTTGGAGCCTTTGCCGGATGAATGGCTGGTTGAAGCCACGGCCAATCCGGAAGCTCGCTATGCCGCCCACGAAAACGTCTCGCTCGCCTTTTTAACCGCCTTACAGGCACTGCCGCCGCGCCAACGAGCCGCATTGATCTTGAGCGACGTGCTGGATTGGTCTTCCCGCGAAGTAGCGGAACTGCTCGGGCTGACCGTCTCCGCGACCAACAGCGTGCTCCACCGGGCGCGGGAGACGCTGGCTAAACACTATCATGGCCGGGACCTGGAGAGCCTGGCCACCGTGCTGGCTAACGAACGAACACAGAGGCTGCTTGAGCGCTATGTGGAAGCCTGGGAAACGGCCGATGTGGCGGGACTAGTCGCATTACTCACAGAGGATGCCACGTTTGCCATGCCGCCCTCACCCTCATGGTATCGCGGGCGTACTGCAATTGCCGTATTCGTCGCCACGACTGTATTTGCGGATCAGGGGATGTTCCCCGGTGAGGCCACGGGCCGTTGGCGGCTACGGCCCACTCGGGCCAATGCTCAGCCCGCCTTTGGCATATATGAACGGGTGGAAAGGAACGAGTATCAAGCCTTCGGGATTCACGTGTTGGCTTGCAAGGCAGACCAACTTGCTCAAATTACTAGCTTTATCGATTCCTCTTTGCCACTCCGCTTCGGCTTGCCGCCGACGCTAACAAGCTGA
PROTEIN sequence
Length: 364
MSKASSQNPTHERIPLPNPVEAERLSAARRGDTHEFSDLAEPYRRELQIHCYRILGSLHEAEDLVQETLLRAWRRLDTYQGRASFRAWLYKIATNACLDALDRTRSQRPLPTRSHPASDPRAPILPPTSEISWLEPLPDEWLVEATANPEARYAAHENVSLAFLTALQALPPRQRAALILSDVLDWSSREVAELLGLTVSATNSVLHRARETLAKHYHGRDLESLATVLANERTQRLLERYVEAWETADVAGLVALLTEDATFAMPPSPSWYRGRTAIAVFVATTVFADQGMFPGEATGRWRLRPTRANAQPAFGIYERVERNEYQAFGIHVLACKADQLAQITSFIDSSLPLRFGLPPTLTS*