ggKbase home page

PLM3-1_170_b1_sep16_scaffold_13155_5

Organism: PLM6_170_b1_sep16_Chloroflexi_64_6

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(3251..3643)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 130.0
  • Bit_score: 204
  • Evalue 8.10e-50
Ribonuclease VapC Tax=Mycobacterium canettii CIPT 140070008 RepID=L0QAB5_9MYCO similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 130.0
  • Bit_score: 205
  • Evalue 2.00e-50
Conserved protein of unknown function with PIN domain, possible toxin VapC22 similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 130.0
  • Bit_score: 205
  • Evalue 5.60e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium canettii → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 393
TTGACAACGCTGCTCCTCGATTCTCACGTCATCCACTGGTGGTCAGCCGAGCCCGTCCGGCTGAGCGCCGCCGCCAGGCGCGCGGTCAAAGAAGCCGACGAGCTGGCGGTCGCGTCGATCTCGTGGTTCGAGCTCGCCTGGCTGGCTGCGCACGAGCGGATCGTCCTCACCGTCCCGATAAGGTCGTGGCTGGAGGGGTTGGCAGCGCAGGTCCGCACGGTACCCATCACACCGGCAGTCGCCGCGACCGCGGTCTCTCTGCCAAGTACGTTTCCCGGCGACCCAGCCGATCGGCTCATCTACGCGACCGCGATAGAGCAAGGCTGGTCACTCGTCACGAAGGATACGCGGCTGCGGGCGCACAAGCACCCCGCGCGCATTACTGTCTGGTGA
PROTEIN sequence
Length: 131
LTTLLLDSHVIHWWSAEPVRLSAAARRAVKEADELAVASISWFELAWLAAHERIVLTVPIRSWLEGLAAQVRTVPITPAVAATAVSLPSTFPGDPADRLIYATAIEQGWSLVTKDTRLRAHKHPARITVW*