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PLM3-1_170_b1_sep16_scaffold_29830_1

Organism: PLM6_170_b1_sep16_Chloroflexi_64_6

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 2..1807

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 614.0
  • Bit_score: 542
  • Evalue 4.40e-151
transcription-repair coupling factor Tax=Ornithinimicrobium pekingense RepID=UPI0003B4A647 similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 661.0
  • Bit_score: 517
  • Evalue 1.40e-143
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 600.0
  • Bit_score: 534
  • Evalue 2.40e-149

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Taxonomy

Knoellia sinensis → Knoellia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1806
CACGAGTACCTCGAGCTGCACTACGCCGAGGGCGACAAGCTTTTCGTGCCGACGGACCAGCTCGACCGCGTGAGCCGCTACATCGGCCCCTCGGACCGCGCGCCGCACCTGACGCGGCTGGCCAGCGGCGAGTGGCAGCGGGCGAAGCAGAGAGTGCGGAAGGCGGTGCAGGCGCTCGCGCGGGACCTGCTTGCGCTATACGCCGCGCGGGAGGTCCTGACGGGCCAGGCACACTCTGCGGACAACGCCTGGCAGATGGAGCTGGAGGCGTCGTTCCCTTACATCGAGACGCTCGATCAGACCGCTGCGATCGCTGCGGTCAAGGAGGACATGCAGAGCGCGCGGCCGATGGACCGGCTGGTCTGCGGCGACGTCGGTTACGGCAAGACGGAGGTGGCGGTGCGCGCCGCGTTTAAGGCCGTCATGGACTCGCAGCAGGCAGCGGTGCTGGTGCCCACCACGGTCCTCGCGCAGCAGCACTTGCAGACGTTCCGCGAGCGGCTGGCGGCGTTTCCCGTGCGTGTCGAGATGCTCTCCCGCTTCCGCTCGGACGCCGAGCAGCGTCAGATCGTCGAGGACCTCGCGGCCGGAGGGATCGACATCATCATCGGGACCCACCGGCTGCTCCAGAAGGACGTGAGCTTCAAGGACCTCGGGCTCGTCGTCATCGACGAAGAGCAGCGGTTCGGGGTCGCGCACAAGGAGCACCTCAAGAAGATGCGGCGCGAGGTCGATGTGCTGACGCTGTCGGCCACGCCGATCCCGCGCACGCTGTACATGGCGCTCGGAGCCCTCCGCGACATGTCGACCATGGAGACCCCGCCGGAGGAGCGGCTGCCGATCAAGACTTACGTCTCGGAGTTCGATGAACGGCTGGCACGCGAGGTAGTGCTGCGAGAGATGGAGCGCGGCGGGCAGGTGTACTTCGTGCACAACCGCGTCCACAACATCGATATGATCGCCACGATCATCGAGTCCGGTCTCGATATCCCGAACGTGAACACGATCGTGATCAACCAGGCGGACAAGCTGGGGCTCGGGCAACTTTACCAGCTCCGCGGCCGCGTCGGCCGCGGAGCGCACCGCGCGTATGCGTACCTCTTCTACGACCGCAAGGCGAGGCTGACAGAAACAGCGAAGCAGCGGCTGCAGACGATCTTCGAGGCGACGGAGCTGGGGGCGGGCTTCCAGATCGCCCTGCGTGACCTTGAGATCCGTGGGGCGGGCAACCTGCTCGGTGCAGAGCAGAGCGGCTTCATGGCGGCGATCGGCTTTGACCTCTACGTCAAACTGCTCTCCGGGGCCGTCGAGCACATCCGAGCGGTGATGCGCGGCGAGCCGCCGCCCCCGGCGGAAGATGCGGCCGGCGTGACGATAGACCTGCCGCTATCGGCGCACCTGCCGCCTTCGTACGTACCCGATCTCAACACGCGGCTCGCGCTTTACCAGCGGCTGAGCGGCGCCGCCGACCCGCAGGAGGTGAGCGCGATCGGCCAGGAGATGGTCGACCGCTTCGGGGAGCCGCCGGCCGCCGCTCGCAGTTTGTTTTATGTCGTGTCCCTCCGCGCCGTCGCCGCGCAGGCGCAGATCCAGTCGATCGCGACCGAGGACGGTATTGCCGTGGTGCGTATGCGAGAGGGCGAGACGCTGCCCCGTGAATCGCTCGAAGCGACGGTTGTGAAGGGCGTGCAGGTCGGGCGCACAGCGCTGCGGGTGGAGCTGGGGGACGGCTGGCGGGAGCGCTTGAGACGCACGATAGAGCAGATAGCGGCGGCCAGGGGCAGCGAAGAGCCGCTGCGGGCATAG
PROTEIN sequence
Length: 602
HEYLELHYAEGDKLFVPTDQLDRVSRYIGPSDRAPHLTRLASGEWQRAKQRVRKAVQALARDLLALYAAREVLTGQAHSADNAWQMELEASFPYIETLDQTAAIAAVKEDMQSARPMDRLVCGDVGYGKTEVAVRAAFKAVMDSQQAAVLVPTTVLAQQHLQTFRERLAAFPVRVEMLSRFRSDAEQRQIVEDLAAGGIDIIIGTHRLLQKDVSFKDLGLVVIDEEQRFGVAHKEHLKKMRREVDVLTLSATPIPRTLYMALGALRDMSTMETPPEERLPIKTYVSEFDERLAREVVLREMERGGQVYFVHNRVHNIDMIATIIESGLDIPNVNTIVINQADKLGLGQLYQLRGRVGRGAHRAYAYLFYDRKARLTETAKQRLQTIFEATELGAGFQIALRDLEIRGAGNLLGAEQSGFMAAIGFDLYVKLLSGAVEHIRAVMRGEPPPPAEDAAGVTIDLPLSAHLPPSYVPDLNTRLALYQRLSGAADPQEVSAIGQEMVDRFGEPPAAARSLFYVVSLRAVAAQAQIQSIATEDGIAVVRMREGETLPRESLEATVVKGVQVGRTALRVELGDGWRERLRRTIEQIAAARGSEEPLRA*