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PLM3-1_170_b1_sep16_scaffold_44857_2

Organism: PLM6_170_b1_sep16_Chloroflexi_64_6

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(943..1848)

Top 3 Functional Annotations

Value Algorithm Source
sen:SACE_1934 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 299.0
  • Bit_score: 422
  • Evalue 2.40e-115
ECF subfamily RNA polymerase sigma factor {ECO:0000313|EMBL:EJJ08262.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 304.0
  • Bit_score: 388
  • Evalue 5.40e-105
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 304.0
  • Bit_score: 382
  • Evalue 1.00e-103

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Taxonomy

Streptomyces auratus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGGACGAACACGAAGCGCTGGCGGAGCGGTTCGAGGAGAACCGTCTCCATCTGCGGGCGGTGGCCTACCGGATGCTCGGCTCGCCGAGCGAGGCCGACGACGCCGTTCAGGAAGCCTGGCTGCGCCTCAACCGGTCCGATACGGGCGGCGTCGAGAACCTAAGGGGATGGTTGACGACGGTCGTCGCGCGCGTGTGCCTGGACATGCTGCGCTCGCGCAAGTCGCGGCGCGAGGAGCCCCTGGACGCGCACGTGCCCGGGCCGGCCCTGAGCCGCGAAGACGGGATTGACCCCGAGCACGAAGCGTTACTGGCCGACGCGGTCGGTCTCGCGCTGCTCGTGGTACTTGAGACTCTGGCTCCCGCTGAACGGGTCGCGTTCGTGCTGCACGACATGTTCGACTTGCCCTTCGACGAGATCGCTCCCATCGTTGGACGCTCCCCGACTGCGGCCAGGCAGCTCGCCAGCCGCGCACGCCGCCGGGTGCAGGGAGCGGCCACGGTTTCGGACGCCGATCGCACCCGCCAGCGACAAGTTGTCGACGCCTTCCTCGCTGCCTCGCGCGGCGGTGACTTCGACGCGCTTCTCGCGGTGCTCGACCCGGACGTCGTGCTGCGAGCCGACAGCGCAGCCGTGCTTGCGAGCGCATCGAGGCAGGAGAAGGGCGCACCGAAGCTGGCGCCGGAGGTCCGCGGTGCGGCGGCCGTGGCCGACACCTTCTCAGGGCGTGCCCGGTTCGCACAACCGGCGCTCGTGAACGGGGCCGCGGGGCTCGTGTGGGCACCGGGTGGACGGCCGCGTGCCGCGATCGCTTTCGCGATTATGCGCGGGAAGATCGTCGAAATCGACCTGATCGCTGACGCCGAGCGCCTTCGCCAGCTCGACCTGACGGTCCTCGACGACTGA
PROTEIN sequence
Length: 302
MDEHEALAERFEENRLHLRAVAYRMLGSPSEADDAVQEAWLRLNRSDTGGVENLRGWLTTVVARVCLDMLRSRKSRREEPLDAHVPGPALSREDGIDPEHEALLADAVGLALLVVLETLAPAERVAFVLHDMFDLPFDEIAPIVGRSPTAARQLASRARRRVQGAATVSDADRTRQRQVVDAFLAASRGGDFDALLAVLDPDVVLRADSAAVLASASRQEKGAPKLAPEVRGAAAVADTFSGRARFAQPALVNGAAGLVWAPGGRPRAAIAFAIMRGKIVEIDLIADAERLRQLDLTVLDD*