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PLM6_170_b1_sep16_Chloroflexi_64_6

PLM3-1_170cm_b1_sep2016_Bacteria_64_6
In projects: PLM3-1_170cm_b1_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Bacteria

Displaying items 1-50 of 501 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3-1_170_b1_sep16_scaffold_44284
Species: BJP_IG2069_Desfulfarculales_53_13 (50%)
2 2004 bp 61.48 7.11 90.87
PLM3-1_170_b1_sep16_scaffold_44150
Phylum: Proteobacteria (66.67%)
3 2008 bp 63.79 9.34 77.99
PLM3-1_170_b1_sep16_scaffold_81828
Order: Rhizobiales (100%)
3 2008 bp 67.18 5.08 88.00
PLM3-1_170_b1_sep16_scaffold_44104
Species: R_Nitrospirae_62_14 (66.67%)
3 2009 bp 62.52 6.65 92.28
PLM3-1_170_b1_sep16_scaffold_44084
Domain: Bacteria (100%)
3 2010 bp 65.37 7.91 63.28
PLM3-1_170_b1_sep16_scaffold_43883
Species: R_Gemmatimonadetes_71_11 (100%)
1 2016 bp 63.19 6.32 93.15
PLM3-1_170_b1_sep16_scaffold_43771
Domain: Bacteria (50%)
4 2018 bp 63.13 6.99 81.76
PLM3-1_170_b1_sep16_scaffold_43308
Domain: Bacteria (100%)
3 2032 bp 61.56 5.17 81.94
PLM3-1_170_b1_sep16_scaffold_70038
Domain: Bacteria (100%)
3 2035 bp 64.57 3.76 85.06
PLM3-1_170_b1_sep16_scaffold_42087
Species: Nitrosospira sp. NpAV (100%)
1 2066 bp 61.76 4.14 97.73
PLM3-1_170_b1_sep16_scaffold_41844
Species: marine sediment metagenome (50%)
4 2073 bp 66.09 6.30 86.16
PLM3-1_170_b1_sep16_scaffold_78525
Domain: Bacteria (50%)
4 2074 bp 64.51 5.71 95.47
PLM3-1_170_b1_sep16_scaffold_41290
Species: marine sediment metagenome (100%)
3 2090 bp 64.88 7.75 92.30
PLM3-1_170_b1_sep16_scaffold_41137
Species: RBG_16_Chloroflexi_64_32_curated (75%)
4 2094 bp 64.28 5.66 84.81
PLM3-1_170_b1_sep16_scaffold_40968
Species: RBG_16_Chloroflexi_64_32_curated (100%)
2 2099 bp 67.17 4.14 84.75
PLM3-1_170_b1_sep16_scaffold_40895
Species: RBG_16_Chloroflexi_68_14_curated (75%)
4 2101 bp 63.49 5.28 93.38
PLM3-1_170_b1_sep16_scaffold_40860
Domain: Bacteria (66.67%)
3 2102 bp 62.61 7.71 54.38
PLM3-1_170_b1_sep16_scaffold_40866
Phylum: Proteobacteria (50%)
6 2102 bp 62.46 8.78 84.21
PLM3-1_170_b1_sep16_scaffold_40748
Species: RIFOXYC1_FULL_Bdellovibrionales_39_130_curated (50%)
2 2106 bp 63.68 9.33 95.58
PLM3-1_170_b1_sep16_scaffold_92002
Species: marine sediment metagenome (50%)
2 2108 bp 65.94 6.26 82.12
PLM3-1_170_b1_sep16_scaffold_40663
Domain: Bacteria (66.67%)
3 2108 bp 65.70 7.26 89.94
PLM3-1_170_b1_sep16_scaffold_40677
Species: Acaryochloris marina (50%)
2 2108 bp 69.54 4.06 99.05
PLM3-1_170_b1_sep16_scaffold_40619 6 2109 bp 63.44 6.54 67.00
PLM3-1_170_b1_sep16_scaffold_40325
Species: marine sediment metagenome (66.67%)
3 2119 bp 63.76 5.17 99.10
PLM3-1_170_b1_sep16_scaffold_40136
Species: R_Nitrospirae_66_17 (100%)
1 2125 bp 62.68 5.93 99.95
PLM3-1_170_b1_sep16_scaffold_122436
Species: RBG_16_Chloroflexi_68_14_curated (50%)
4 2128 bp 65.88 5.57 77.54
PLM3-1_170_b1_sep16_scaffold_39876
Species: RBG_13_Chloroflexi_50_21_curated (50%)
2 2133 bp 63.53 4.43 100.00
PLM3-1_170_b1_sep16_scaffold_39715
Species: Sphaerobacter thermophilus (100%)
1 2138 bp 66.74 7.93 99.91
PLM3-1_170_b1_sep16_scaffold_39257
Domain: Bacteria (80%)
5 2152 bp 65.10 7.04 83.78
PLM3-1_170_b1_sep16_scaffold_65705
Species: CSP1_4_Chloroflexi (50%)
4 2156 bp 63.03 5.15 87.94
PLM3-1_170_b1_sep16_scaffold_39108
Species: RBG_16_Chloroflexi_64_32_curated (66.67%)
3 2156 bp 65.86 5.29 83.35
PLM3-1_170_b1_sep16_scaffold_89238 4 2162 bp 66.37 6.17 74.38
PLM3-1_170_b1_sep16_scaffold_38843
Species: marine sediment metagenome (50%)
2 2164 bp 64.93 6.17 90.80
PLM3-1_170_b1_sep16_scaffold_38741
Species: RBG_16_Chloroflexi_57_8_curated (50%)
2 2168 bp 66.47 6.43 83.03
PLM3-1_170_b1_sep16_scaffold_38617
Species: RBG_16_Chloroflexi_68_14_curated (66.67%)
3 2171 bp 63.10 5.25 88.30
PLM3-1_170_b1_sep16_scaffold_38588
Domain: Bacteria (66.67%)
3 2172 bp 61.65 4.83 94.89
PLM3-1_170_b1_sep16_scaffold_38550
Species: marine sediment metagenome (50%)
2 2173 bp 62.59 5.52 89.19
PLM3-1_170_b1_sep16_scaffold_52643 4 2186 bp 64.32 6.04 78.50
PLM3-1_170_b1_sep16_scaffold_38117
Species: uncultured Acidobacteria bacterium (50%)
2 2187 bp 65.75 7.75 99.45
PLM3-1_170_b1_sep16_scaffold_38128
Phylum: Chloroflexi (66.67%)
3 2187 bp 64.43 8.09 81.48
PLM3-1_170_b1_sep16_scaffold_37657
Species: BJP_IG2069_Chloroflexi_70_12 (100%)
1 2203 bp 64.09 4.49 99.95
PLM3-1_170_b1_sep16_scaffold_37468
Domain: Bacteria (66.67%)
3 2208 bp 63.13 5.10 75.14
PLM3-1_170_b1_sep16_scaffold_61584
Phylum: Chloroflexi (66.67%)
3 2208 bp 65.35 6.25 52.31
PLM3-1_170_b1_sep16_scaffold_37430
Species: RBG_16_Chloroflexi_68_14_curated (75%)
4 2209 bp 64.55 5.02 97.24
PLM3-1_170_b1_sep16_scaffold_37424
Species: RBG_16_Chloroflexi_64_32_curated (66.67%)
3 2210 bp 64.07 6.72 87.69
PLM3-1_170_b1_sep16_scaffold_66541
Phylum: Actinobacteria (66.67%)
3 2218 bp 66.73 9.20 70.60
PLM3-1_170_b1_sep16_scaffold_37082
Species: Candidatus Entotheonella sp. TSY2 (100%)
3 2222 bp 62.51 4.46 95.99
PLM3-1_170_b1_sep16_scaffold_126143
Species: Candidatus Entotheonella sp. TSY2 (50%)
2 2233 bp 64.80 4.16 91.22
PLM3-1_170_b1_sep16_scaffold_89730
Species: Microbispora sp. ATCC PTA-5024 (100%)
2 2236 bp 64.85 7.78 86.00
PLM3-1_170_b1_sep16_scaffold_82326
Domain: Bacteria (66.67%)
3 2236 bp 62.52 5.03 70.71
Displaying items 1-50 of 501 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.