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PLM1_60_b1_redo_sep16_scaffold_41

Search features with annotation key words

Displaying items 31-60 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_41_31

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comp(21517..22596)
DNA (1080bp) protein (360aa)
Probable aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_115_G03.;"
glycine cleavage system T protein (EC:2.1.2.10)
Aminomethyltransferase Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=GCST_HALOH
PLM1_60_b1_redo_sep16_scaffold_41_32
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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22686..23564
DNA (879bp) protein (293aa)
Lipoyl synthase, mitochondrial Tax=Danio rerio RepID=LIAS_DANRE
hypothetical protein
Tax=RBG_16_KB1_OP1_55_9_curated
PLM1_60_b1_redo_sep16_scaffold_41_33
unknown

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23668..23952
DNA (285bp) protein (95aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_41_34
unknown

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comp(24059..24760)
DNA (702bp) protein (234aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_41_35
unknown

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25789..26055
DNA (267bp) protein (89aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_41_36
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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26210..27568
DNA (1359bp) protein (453aa)
Signal recognition particle 54 kDa protein Tax=uncultured archaeon RepID=I3RKL0_9ARCH
srp54; signal recognition particle SRP54 subunit protein
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_41_37
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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27583..28653
DNA (1071bp) protein (357aa)
Putative pseudouridylate synthase-like protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE30_NITGG
pseudouridylate synthase-like protein
Putative pseudouridylate synthase-like protein {ECO:0000313|EMBL:AFU59616.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_41_38
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(28717..28902)
DNA (186bp) protein (62aa)
30S ribosomal protein S27ae Tax=Candidatus Nitrososphaera gargensis RepID=K0INM2_NITGG
rps27ae; 30S ribosomal protein S27ae
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_41_39
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(28918..29289)
DNA (372bp) protein (124aa)
30S ribosomal protein S24e Tax=uncultured archaeon RepID=I3RKL5_9ARCH
ribosomal protein S24E
Ribosomal protein S24E {ECO:0000313|EMBL:AIF82862.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_41_trna_2
unknown

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comp(29364..29452)
DNA (89bp)
transferRNA Arg
PLM1_60_b1_redo_sep16_scaffold_41_40
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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29602..30315
DNA (714bp) protein (238aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_01419};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoglycolate phosphatase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF98_NITGG
PLM1_60_b1_redo_sep16_scaffold_41_41
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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30319..32232
DNA (1914bp) protein (638aa)
argS; arginine--tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Arginine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM12_NITGG
PLM1_60_b1_redo_sep16_scaffold_41_42
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(32284..32553)
DNA (270bp) protein (90aa)
phosphoribosylformylglycinamidine synthase, purS protein (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Putative phosphoribosylformylglycinamidine synthase PurS Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFC8_NITGG
PLM1_60_b1_redo_sep16_scaffold_41_43
Yersinia aldovae, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(32631..33002)
DNA (372bp) protein (124aa)
Putative uncharacterized protein Tax=Yersinia aldovae ATCC 35236 RepID=C4U5U2_YERAL
putative conserved membrane protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEP96709.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia aldovae ATCC 35236.;"
PLM1_60_b1_redo_sep16_scaffold_41_trna_1
unknown

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33235..33309
DNA (75bp)
transferRNA Thr
PLM1_60_b1_redo_sep16_scaffold_41_44
unknown

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33528..33890
DNA (363bp) protein (121aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_41_45
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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34001..34282
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN37_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58694.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_41_46
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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34369..35016
DNA (648bp) protein (216aa)
SNF7-domain-containing protein Tax=Candidatus Nitrososphaera gargensis RepID=K0IIB5_NITGG
SNF7-domain-containing protein
SNF7-domain-containing protein {ECO:0000313|EMBL:AIC14677.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_41_47
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(35021..35359)
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK80_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58692.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_41_48
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(35666..36826)
DNA (1161bp) protein (387aa)
bioF; 8-amino-7-oxononanoate synthase (EC:2.3.1.47)
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:AFU58691.1}; EC=2.3.1.47 {ECO:0000313|EMBL:AFU58691.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
8-amino-7-oxononanoate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBQ9_NITGG
PLM1_60_b1_redo_sep16_scaffold_41_49
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(36801..37808)
DNA (1008bp) protein (336aa)
bioB; biotin synthase (EC:2.8.1.6)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Biotin synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFX1_NITGG
PLM1_60_b1_redo_sep16_scaffold_41_50
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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38345..38935
DNA (591bp) protein (197aa)
Putative resolvase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN36_NITGG
resolvase
Putative resolvase {ECO:0000313|EMBL:AFU58689.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_41_51
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(38950..40236)
DNA (1287bp) protein (429aa)
adenosylmethionine-8-amino-7-oxononanoate transaminase (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate transaminase {ECO:0000313|EMBL:AIF83870.1}; EC=2.6.1.62 {ECO:0000313|EMBL:AIF83870.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Adenosylmethionine-8-amino-7-oxononanoate transaminase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIB2_NITGG
PLM1_60_b1_redo_sep16_scaffold_41_52
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

40485..40868
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFW7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14686.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_41_53
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(41262..41621)
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFW2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58680.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_41_54
unknown

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comp(41674..42006)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_41_55
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(42118..43215)
DNA (1098bp) protein (366aa)
acetoacetyl-CoA thiolase or ketoacyl-CoA thiolase (EC:2.3.1.9)
Acetoacetyl-CoA thiolase or ketoacyl-CoA thiolase {ECO:0000313|EMBL:AFU58682.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AFU58682.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Acetoacetyl-CoA thiolase or ketoacyl-CoA thiolase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK75_NITGG
PLM1_60_b1_redo_sep16_scaffold_41_56
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(43208..44209)
DNA (1002bp) protein (334aa)
mer; luciferase-like monooxygenase family protein (EC:1.5.99.11)
Luciferase-like monooxygenase family protein {ECO:0000313|EMBL:AFU58683.1}; EC=1.5.99.11 {ECO:0000313|EMBL:AFU58683.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Luciferase-like monooxygenase family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIA9_NITGG
PLM1_60_b1_redo_sep16_scaffold_41_57
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(44202..44897)
DNA (696bp) protein (232aa)
Putative nucleotidyl transferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN35_NITGG
nucleotidyl transferase
Putative nucleotidyl transferase {ECO:0000313|EMBL:AFU58684.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_41_58
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(44967..45545)
DNA (579bp) protein (193aa)
R-protein L6p (Fragment) Tax=Candidatus Nitrososphaera gargensis RepID=E0A1G8_9ARCH
R-protein L6p {ECO:0000313|EMBL:ADK26024.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
rpl6p; 50S ribosomal protein L6p
Displaying items 31-60 of 108 in total

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