ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_966_19

Organism: PLM1_60_b1_sep16_Thaumarchaeota_Marine_Group_I_35_23

near complete RP 32 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 38 / 38
Location: 21574..21900

Top 3 Functional Annotations

Value Algorithm Source
NHL repeat containing protein bin=GWB2_Ignavibacteria_35_12 species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 94.0
  • Bit_score: 60
  • Evalue 6.60e-07
NHL repeat containing protein similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 50.0
  • Bit_score: 53
  • Evalue 2.30e-05
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 36.2
  • Coverage: 94.0
  • Bit_score: 60
  • Evalue 9.30e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYC2_FULL_RIF_IGX_35_21_curated → RIF-IGX → Bacteria

Sequences

DNA sequence
Length: 327
ATGTTAAAATTAGCAAATAACAAGTTGAATTTAATATTTACAATTTTCTCATCAGTACTACTGATACTTTTATTCAGTTTAACTCCAAATAACTCTATTGCTTTTGGTTATCAAAATTACGTGCTGGTTCAAAATTGGGAAAGGAATAACGATATACATAAAATTAGTGAAATACATGATGTACTTGCCACCAAAGATTTTGTATTTGTACCAGATTATGAAAATCATAATATAAAGAAATTTACAAAAAATGGGACATTTATTTTAGAGTGGGGTCAGGAGGGTACAGGTCCAGGACAATTTGATACTCCGCATAGTATGACTATT
PROTEIN sequence
Length: 109
MLKLANNKLNLIFTIFSSVLLILLFSLTPNNSIAFGYQNYVLVQNWERNNDIHKISEIHDVLATKDFVFVPDYENHNIKKFTKNGTFILEWGQEGTGPGQFDTPHSMTI