ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_1807_2

Organism: PLM1_60_b1_sep16_Thaumarchaeota_Marine_Group_I_35_23

near complete RP 32 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 38 / 38
Location: 1424..2341

Top 3 Functional Annotations

Value Algorithm Source
Protocatechuate 3 4-dioxygenase beta subunit like protein Tax=Nitrosococcus oceani RepID=Q3JC14_NITOC similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 268.0
  • Bit_score: 208
  • Evalue 9.40e-51
protocatechuate 3,4-dioxygenase beta subunit similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 309.0
  • Bit_score: 276
  • Evalue 4.60e-72
Protocatechuate 3,4-dioxygenase beta subunit {ECO:0000313|EMBL:AIF84954.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 309.0
  • Bit_score: 276
  • Evalue 2.30e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera evergladensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 918
ATGTCTTTAACAAAATTTAAAGGGACTAAACCTTGTACATTCATTGTGTTGCACAGACTTAGAATGTCAAAACAGATTTCGAGGGCGTTAACTGTCAGCCTGTTCTCTCTAGTTCTCGTTTTGACGTATGTGAAAATTGATAGTATGGCAAATCCATTGGGACAAGTGGTAAATGCACTATCAGATGAAGTATTGTCAATAAGACCTGTTCAATTTGGCTTTTTGTCGGAACTTTCTCCATCTGAAAAAGCTGCCTCAGCATCAGGATCCTGTGCACTTACACCTTCCATTAAACTAAATGGTACTCCTCAGCAGACTGAGGGTCCATACTTTGTAGACAAAATGCCTAATCGCTCCGATATAAGATCAGATAGTTCTGATGGCTCAGTAAAAAAAGGAATTCTATTACGTCTAATCACTCACGTATATGATGTAGATAATGGCATATGTGTTCCTCTGAGCGGAGCAAAAGTAGATATTTGGCATACAGATTCACAAGGTGTCTATTCAGCAGTTAAGGACATGGGAACCTCGGGAAGGAATTTCCTTCGTGGATATCAAGTGACAGATAGTAATGGGACTGCTGAATTTACAACTATTTATCCAGGTTGGTATGAAGGTAGAACAATCCATATTCATGATAAGGTTCGTGTGTTCAACGGATCAGAGACAATCTTGGAATGGACAAGCCAGCTTTACTTTAACAATTCCATGAATCAACAAGTACACAAACAAGCTCCATATAGTAATCATGGTCCTCCTCAAATTACAAATGAAGACGATATTGTTTATAGTCAAGGCTCAGTTGATGGGCTAATCGATAGAAATAGTGGTGAACGGCTAATAGTCAATTTAACAAAAGACAGTGTTGGCTACATTGGAGAGTTCAATATTGTATTAAATGCAGACAAAAAATAA
PROTEIN sequence
Length: 306
MSLTKFKGTKPCTFIVLHRLRMSKQISRALTVSLFSLVLVLTYVKIDSMANPLGQVVNALSDEVLSIRPVQFGFLSELSPSEKAASASGSCALTPSIKLNGTPQQTEGPYFVDKMPNRSDIRSDSSDGSVKKGILLRLITHVYDVDNGICVPLSGAKVDIWHTDSQGVYSAVKDMGTSGRNFLRGYQVTDSNGTAEFTTIYPGWYEGRTIHIHDKVRVFNGSETILEWTSQLYFNNSMNQQVHKQAPYSNHGPPQITNEDDIVYSQGSVDGLIDRNSGERLIVNLTKDSVGYIGEFNIVLNADKK*