ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_331_12

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(12266..12922)

Top 3 Functional Annotations

Value Algorithm Source
Xre family DNA-binding protein Tax=Frankia sp. (strain EuI1c) RepID=E3J644_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 150.0
  • Bit_score: 69
  • Evalue 2.80e-09
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 150.0
  • Bit_score: 69
  • Evalue 8.00e-10
Xre family DNA-binding protein {ECO:0000313|EMBL:ADP78335.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 150.0
  • Bit_score: 69
  • Evalue 4.00e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGGCGGGCAGAGTGCGACCTCTACGAGAGGTGTTGGCGGCCGGGCTGAAGACAACCCGCATAGGACTGGGGCTCAGGCAGGAAGACGCCGCCGCACGGGCCCGGGCTCATGGGCTGAGTACCTGGATTCGCGGAACGGTGGCGCAGGCGGAGGTGGGGGCGCGCCGGTTGACGTTGGAGGAAGTGCTCCTGTTGTCCTTGGCGTACAAGACCACGCCGGCCGCACTCATTGTGGGCGAGGACGACGAGCTCGTAGAGCTGGCCGTACAGGCTCGGGTACCCGCTGGGACGCTGAGGGCGCTCCTGTCGGGTCAGGCCGTGGCCACCAACGGCCCGCCCGGTGCCGCAGCGGCTGAGCGAGAACTGGACGGCATCGGAGACGCAGAGCGGCACGCTGCCCGGCGGCTGGGAGTGCCGGCTGAGCAGGTCGCCCGCGCGGCGGTGGCGCTGTGGGGACGCCCACTATCGGAGGAGCGGGACCGGCGCCTGGCGGACCCGCCACCGGACCTCTCCGCTCGCCGGCTCCAAGCGCTGCGGGGTCACGTGACTCGTGACTTGATGTCAGAGCTCCAGCCCGTGCTACGCGGGCGGCCAGTCGTCCGACGCGAGCCAACCCCGACGCCCAGCGCCACTCGCGCATCAGGAGAACGCCCATGA
PROTEIN sequence
Length: 219
MAGRVRPLREVLAAGLKTTRIGLGLRQEDAAARARAHGLSTWIRGTVAQAEVGARRLTLEEVLLLSLAYKTTPAALIVGEDDELVELAVQARVPAGTLRALLSGQAVATNGPPGAAAAERELDGIGDAERHAARRLGVPAEQVARAAVALWGRPLSEERDRRLADPPPDLSARRLQALRGHVTRDLMSELQPVLRGRPVVRREPTPTPSATRASGERP*