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PLM1_60_b1_redo_sep16_scaffold_1252_7

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 7568..10078

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional accessory protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L0J7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 841.0
  • Bit_score: 1239
  • Evalue 0.0
Transcription accessory protein {ECO:0000313|EMBL:KIZ15134.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 837.0
  • Bit_score: 1261
  • Evalue 0.0
RNA binding S1 similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 851.0
  • Bit_score: 1231
  • Evalue 0.0

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Taxonomy

Streptomyces natalensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2511
ATGTCAGTGCACCAGCGGATCGCCGAGGAGCTCGGGGTACGCGAGCGGCAGGTCAGGGCGGCCGTGGAGCTGCTGGACGGCGGCTCGACCGTGCCGTTCATCGCCCGGTACCGCAAGGAAGCCACCGAGATGCTCGACGACGCGCAGCTGCGCACGCTCGAGGAACGGCTGCGCTACCTGCGTGAGCTGGACGAGCGGCGGGCGGCGGTGCTCGACTCGATCCGCTCGCAGGGCAAGCTCGACGACGCGCTCGAGGCGCAGATCCTGGCCGCCGACTCGAAGGCCCGGCTGGAGGACATCTACCTCCCGTACAAGCCGAAGCGGCGGACGAAGGCGCAGATCGCGCGAGAGGCGGGGCTCGAACCGCTCGCCGAAGGGCTGCTGAGCGACCCTTCCGTGGATCCCCAGGCCGCCGCCGCGGCGTTCGTGGACGCGGAGAAGGGGGTGGCGGACGCTCAAGCCGCCCTCGACGGCGCCCGCGCCATCCTCGTCGAGCGGTTCGCCGAGGACGCCGACCTGATCGGTGAGCTGCGCGAGCGGATCTGGTCGCGCGGGCGGCTGGTGGCTCGCGTCAAGGAGGGTCAGGAGGTGGCCGGCGCGAAGTTCTCCGACTACTTCGACTTCTCGGAGCCGTTCACCAAGCTGCCGTCCCACCGCATCCTCGCCATGTTCCGCGGCGAGAAGGAGGAGGCGCTCGACCTCACCGTCGAGCCGGAGGAGCTGTCTGAGGACGGCACGAGCAGCTTCGAGCCACTCATTGCCTACCGCTTCGGCATCGCCGACCGGGGCCGGCCGGGTGACCGCTGGCTGGGCGAGACGGTCCGGTGGGCGTGGCGCACCCGGATCCTCGTCCACCTCGACGTCGACATGCGGATCCGGCTCAAGCAGGAGGCCGAGGACGAAGCCGTCCGCGTGTTCGCCGCGAACCTGCGTGACCTGCTGCTCGCCGCGCCAGCCGGTACCCGCCCGACGATGGGCCTGGACCCCGGCTTCCGTACCGGTGTGAAGGTCGCCGTAGTCGACGCGACAGGCAAGGTCGTCGCCACCCACACGATCTACCCGCACGTGCCGCAGCGGCGCTGGGACGAGTCGATCGCCGTCCTGGCCCACCTCGCCAAGCAGCACAAGGTCGAGCTGATCGCCATCGGAAACGGCACCGCGTCCCGCGAGACCGACAAGCTGGCCGGCGATCTCATCACCCAGCACCCGGATCTCAAGCTCACCAAGGTCGTCGTCTCCGAAGCCGGTGCCTCGGTCTACTCCGCCTCGGCGTACGCCTCCTCGGAACTGCCCGAGCTCGACGTGTCGCTGCGCGGCGCGGTCTCGATCGCGCGGCGGCTGCAAGATCCGCTGGCCGAGCTGGTAAAGATCGATCCCAAGTCGATCGGGGTGGGCCAGTACCAGCACGATCTGTCGGAGTTCAAGTTGTCCCGCTCGCTCGACGCGGTGGTCGAGGACTGCGTGAACGGCGTCGGGGTCGATGTGAACACCGCCTCGGCACCGCTGCTGACGCGCGTGTCCGGGATCGGTGCCGGGCTCGCCGAGAACATCGTGCTGCACCGGGACACGCACGGCCCGTTCCGCTCCCGGAGCGCCCTCAAGGAGGTGCCCCGGCTCGGCCCGAAGGCGTTCGAGCAGTGCGCCGGCTTCCTCCGGATCCCGGCCGGCGACGACCCGCTCGACTCGTCCAGCGTCCACCCCGAGGCGTACCCGGTCGTGCGCCGGATCCTCGCCGCCGCGGGCGCCGACCTCAAGGCGCTGATCGGCAACAGCGACACCCTGCGCAAGCTCAAGCCGGCCGACTTCGTCGACGCCACGTTCGGCCTGCCGACCGTCACCGACATCCTCGGCGAGCTGGAGAAGCCCGGCCGGGACCCGCGTCCGGCGTTCAAGACGGCCACGTTCACCGAGGGCGTCGAGGAGCTCAAGGACCTCAAGCCCGGCATGGTCCTGGAGGGCGTCGTCACGAACGTCGCGGCGTTCGGCGCGTTCGTCGACATCGGCGTCCACCAGGACGGCCTGGTGCACGTCTCGGCGATGTCGCGGACGTTCGTCAAGGACCCGCGTGACGTGGTGAAGCCGGGCGACATCGTCCGCTGCAAGGTGCTGGAGGTCGACATCCCGCGCAAGCGCATCGGGCTGACCCTGCGCCTCGACGACGACGCGACCCCCGCCGCTGCCGAGCGCGGGCCCTCCGGCGGCGGGCGGCGCGACGGCGGTGGCGGGCGCGAAGGCCGGCAGGCCGGTGGCGGCGGGCGCGATGGCGGCGGTGGGCGGCCCGGCGGCGGCACTGGCGGCGCCGGGGGCCAGCGTGGCAGCGGCGGCGCTGGTGGGCAGCGTGGCAGCGGCGGCGCTGGTGGGCAGCGTGGCGGGGGCCAGCGCGACGCGAGCGGTCGTGGCGGGCAGCAACGGGGCGGCCAGCGTGGCGGGCAGGGGCGCGACTCTGGCGGTGGCGGTGCCATGGCGGATGCGCTGCGCCGCGCCGGCCTCGCCGGGCCCGACAAGTCGTAG
PROTEIN sequence
Length: 837
MSVHQRIAEELGVRERQVRAAVELLDGGSTVPFIARYRKEATEMLDDAQLRTLEERLRYLRELDERRAAVLDSIRSQGKLDDALEAQILAADSKARLEDIYLPYKPKRRTKAQIAREAGLEPLAEGLLSDPSVDPQAAAAAFVDAEKGVADAQAALDGARAILVERFAEDADLIGELRERIWSRGRLVARVKEGQEVAGAKFSDYFDFSEPFTKLPSHRILAMFRGEKEEALDLTVEPEELSEDGTSSFEPLIAYRFGIADRGRPGDRWLGETVRWAWRTRILVHLDVDMRIRLKQEAEDEAVRVFAANLRDLLLAAPAGTRPTMGLDPGFRTGVKVAVVDATGKVVATHTIYPHVPQRRWDESIAVLAHLAKQHKVELIAIGNGTASRETDKLAGDLITQHPDLKLTKVVVSEAGASVYSASAYASSELPELDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDLSEFKLSRSLDAVVEDCVNGVGVDVNTASAPLLTRVSGIGAGLAENIVLHRDTHGPFRSRSALKEVPRLGPKAFEQCAGFLRIPAGDDPLDSSSVHPEAYPVVRRILAAAGADLKALIGNSDTLRKLKPADFVDATFGLPTVTDILGELEKPGRDPRPAFKTATFTEGVEELKDLKPGMVLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSRTFVKDPRDVVKPGDIVRCKVLEVDIPRKRIGLTLRLDDDATPAAAERGPSGGGRRDGGGGREGRQAGGGGRDGGGGRPGGGTGGAGGQRGSGGAGGQRGSGGAGGQRGGGQRDASGRGGQQRGGQRGGQGRDSGGGGAMADALRRAGLAGPDKS*