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PLM1_60_b1_redo_sep16_scaffold_1789_15

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(10965..12875)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding transcriptional activator of the SARP family Tax=Polaromonas sp. CF318 RepID=J2LCN3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 620.0
  • Bit_score: 573
  • Evalue 1.80e-160
DNA-binding transcriptional activator of the SARP family {ECO:0000313|EMBL:EJL82923.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 620.0
  • Bit_score: 573
  • Evalue 2.50e-160
putative AfsR-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 598.0
  • Bit_score: 448
  • Evalue 2.40e-123

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Taxonomy

Polaromonas sp. CF318 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1911
GTGGCAGCCCGAGGGGGTCTGGCCGAATGTACGCTCTCGAACGTGGGCCTGGCGATTCACTTGCTCGGCAAACCTGCCGTACTCCGCGACGGCAGACCTGTCGCACGCCCGAAGGGCCGCAAGGTGTGGGCCCTGCTCACATATCTTGTGTGCTCGGATCGCCCCACCAGTCGGGAGCAGCTCGCACGGCTGTTGTTCAGCGAAGCGGACGATCCGCTCGGGGCTTTGCGCTGGAATCTCGCCCAATTGCGTCGCCTGCTCGGCGAGCGGGAGGCGCTGCAAGGCGAACAGGTGCGACTGCGGCTCCCACGCGACACGTTCGTTGACGTACGGACGGTCACTCGCGGGACGTGGTTGGAGGGCGCCAGAGTGGCGGGCCTCGGTCGCGACCTGCTCGAGGGCATGGACTTCGCCTCGAGCCCTGCGTTCGAGTCCTGGCTGCTGTCGGAGCGCCGCCACGTCAAGGCTTCCTCGGAGGCGATTCTGCGCGAAGCGGCGCTGGCGCGGCTTGGCTCGGGGGACCCGAGAGGCGCCGCGGAGCTCGCGGCACGGCTGGTCCAGCTCAACCCGCTGGACGAGGGATTTCAGGCCCTCCTCATCCGAACGCTGGTCTTGGCCGGCGAGGATAGCGCTGCGAAGCAGCAGTTCGAGGCCTGCGTCGCGCTCTTTCGTAAGGAACTCGGGGTGGAACCGGGCCCGGATGTCATCGCGGCCACCGAAGCGGCCGGACAAGCGAGCACCGAGGCGACCGCTGCGGCGGCCACGGCGCCGACCCGTTCCGGGACGAGTGCGGCGCGCGCGCAGCTGCATGCGGGCCAAGCAGCCTTGGTTGCCGGCGACATCGAACTTGGGCTCCGGTGCCTACGCGCGGCGGTAACTGAAGCGCACCGGTGCGGCGGCGTCGAGACTCAGGTGGAGGCCCTCGTGGCGCTGGGCTCGAGCCTCATCAACGCGGTGAGGAGCAGGGACGAGGAGGGAGCGGCCGCGCTTCACGAGGCGATCTCCCTTGCCGTGACGGCCGGGCAGCGGTCGCTGATCGGGACCGCGTATCGCGAGCTCGGGTTCGTCGAGTTCCTGCGGGGCCGCTATGAGCGGGCGGAGCTGCTCCTGGGGGAGTCCATCGCCGTCTCCGGCGACCAGCCGGCCGGTCGGGCAACCGCCCTGGTCCTTCTCGGCGCCTGCTTCACCGACACGGCCGACTACCCGACGGCGCTGGAGCATCTCGCTGGGGCGGTCGAGCTCGCCGCTCCGCTCGAAGACTGCCGGCCGCTGGCACGCGGCTTGGCGTTCACCGCCCGAGCTTACCTCCTGAGGAATGAGCTCCCCGGGGCCCGAGAGGCCGCGACACGCTCGCTCGAGATTGCCCGCAGGTCGTGGCCCGCGTACCTGCCGTGGCCGGCGAGCCTGCTCGCCGAGGTCGACTTGGAGGAGGGCGATCTCGACCGTGCCCGCGAAGGGTTTCAGCACGCGTTCGAGCTGGGCTGCCAGTTCGGAGATCCGTGCTGGGAAGCCATGGCGGCCCGCGGGATCGGCCGAGTCGAGGCAGCGCATGGGAACGCCGACGCGGCGATCGGTTGGCTGGTGGATGCGACCGTTCGTGCGGTGCGACTCCCGGACGCCTACCTGTGGGCGCAGGGATACACGCTCGACGCCCTGTGCACGGTGGCCATCGAGCATGGAGCGAGGAATGCGGCGAGGTGGGTCACCGACCTGGAGTCGCTCGCGGCGCGTACGGGCATGCGTGAGCTGCTGGCTCGGGCGTACCTGCACCGGTGTCGGCTCGGGGACGATGCCGCACTGGTCGCCGCCACGCTGCTGGTCGACGAGATCGACAATCCCGCTCTCCAGAAGCAGCTGGGAGACGTCACGACCTCCGCCGCCGGACCGGCGGCCGGTGAGGACCGGTTCTGA
PROTEIN sequence
Length: 637
VAARGGLAECTLSNVGLAIHLLGKPAVLRDGRPVARPKGRKVWALLTYLVCSDRPTSREQLARLLFSEADDPLGALRWNLAQLRRLLGEREALQGEQVRLRLPRDTFVDVRTVTRGTWLEGARVAGLGRDLLEGMDFASSPAFESWLLSERRHVKASSEAILREAALARLGSGDPRGAAELAARLVQLNPLDEGFQALLIRTLVLAGEDSAAKQQFEACVALFRKELGVEPGPDVIAATEAAGQASTEATAAAATAPTRSGTSAARAQLHAGQAALVAGDIELGLRCLRAAVTEAHRCGGVETQVEALVALGSSLINAVRSRDEEGAAALHEAISLAVTAGQRSLIGTAYRELGFVEFLRGRYERAELLLGESIAVSGDQPAGRATALVLLGACFTDTADYPTALEHLAGAVELAAPLEDCRPLARGLAFTARAYLLRNELPGAREAATRSLEIARRSWPAYLPWPASLLAEVDLEEGDLDRAREGFQHAFELGCQFGDPCWEAMAARGIGRVEAAHGNADAAIGWLVDATVRAVRLPDAYLWAQGYTLDALCTVAIEHGARNAARWVTDLESLAARTGMRELLARAYLHRCRLGDDAALVAATLLVDEIDNPALQKQLGDVTTSAAGPAAGEDRF*