ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_2430_5

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 4107..5102

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor {ECO:0000313|EMBL:ETK37918.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ETK37918.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 318.0
  • Bit_score: 415
  • Evalue 4.50e-113
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00037CB5F0 similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 321.0
  • Bit_score: 397
  • Evalue 6.90e-108
RNA polymerase factor sigma-70 similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 318.0
  • Bit_score: 391
  • Evalue 1.80e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGGCCGACAGCGAGGAGTTCACGCGGCTGGCGGACCCGTTCCGGCGTGAGCTGCTTGCGCACTGCTACCGGATGCTCGGCTCGGTGCATGATGCCGAGGACCTGGTGCAGGAGACCTATCTGCGGGCCTGGCGCTCATACGACGGGTTCGAGGGCCGGTCGTCGCTGCGAACCTGGCTGTACCGGATTGCGACCAACGCGTGCTTGCGTGCGCTCGAACAGGGCGGCCGCCGGCCGTTACCGTCCGGGCTGGGTGCTCCGAGCGATGACCCGGAACGCCCCTTGGCGCCGGAACCGGCGGGCGTGGCGTGGCTGCAGCCGATCCCCGGCGCGATGCTGGGGGCCGAGCCGGCCGATCCGGCGGAGGTCGTCGCCTCTCGTGACAGTATCCGGTTGGCGTTCGTGGCCGCGTTGCAGCATCTGCCCGCCCGGCAACGCGCGGTGCTGATCCTGCGTGACGTGCTGGGATGGCGGGCGGCCGAGGTCGCCAAGCTGCTCGGCACCAGCACCGCGGCGGTCAACAGCGCGCTGCAACGCGCCCGGACGCACCTCGCCCGGGTGGCACCCGCCGAAGACGATGTCGCCGAGCCGGCCGAGCCGGACCTCCGCGCGCTGCTCGACCGGTACGTCGCAGCGTTCGAGGACGCCGACATCACCGCCCTCGATCAGGTGCTGCGGGATGACGTCGAACTGGAGATGCCGCCGCTCCCAACGTGGTTCGCCGGCCGCCAGGCTGTCAGGGGTTTCTTCTCCTCCCAGGTCCTCACCGGACTGGGCCAGTTCCGAATGGTCACGACTACGGCCAACGGACAGCCCGCCGTCGCGGCGTACCGGCGCGGGCGCGACGGCGGGTACCACGCGCACGCTGTGCACGTGCTCACGGTCACCCGCACCGGGATCGCGCGGATAGTCGCGTTCCTAGACCCGCGCCTGTTCGCCGCCTTCGGCCTGCCGACGTCGTACGGCCCGGTCACGGAGGCGATCGTGTGGCCATGA
PROTEIN sequence
Length: 332
MADSEEFTRLADPFRRELLAHCYRMLGSVHDAEDLVQETYLRAWRSYDGFEGRSSLRTWLYRIATNACLRALEQGGRRPLPSGLGAPSDDPERPLAPEPAGVAWLQPIPGAMLGAEPADPAEVVASRDSIRLAFVAALQHLPARQRAVLILRDVLGWRAAEVAKLLGTSTAAVNSALQRARTHLARVAPAEDDVAEPAEPDLRALLDRYVAAFEDADITALDQVLRDDVELEMPPLPTWFAGRQAVRGFFSSQVLTGLGQFRMVTTTANGQPAVAAYRRGRDGGYHAHAVHVLTVTRTGIARIVAFLDPRLFAAFGLPTSYGPVTEAIVWP*