ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_2430_15

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(11889..12362)

Top 3 Functional Annotations

Value Algorithm Source
Transposase mutator type Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 154.0
  • Bit_score: 228
  • Evalue 3.40e-57
transposase mutator type similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 154.0
  • Bit_score: 228
  • Evalue 9.70e-58
Transposase mutator type {ECO:0000313|EMBL:AEA28929.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 154.0
  • Bit_score: 228
  • Evalue 4.80e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 474
GTGACCGAGATGATCGGCGCCGTGCCGGAGCAGAGTGATCATCAGCAGTTAGTCCAGGAGCTCGTCGAGCGGGCCCGCGCCGAGGGGTTGGAACTCATCGGCCCGGGAGGGTTGTTGACGGGCCTGACCAAGACGGTGCTGGAGACCGCGCTGGAAGCCGAGATCAGTGAGCATCTGGGGTATGACAAGCATGATCCGGCTGGGCGGAGCCGGGAGAACTCCCGTAATGGCACGCGGTCGAAGACGGTGCTGACCGAGGTCGGGACGGTGGAGATCGACGTGCCGAGGGATCGGGACGGCTCGTTCGACCCGGCCATCGTGCGCAAACGCCAGCGATGGCTGGACGGCATCGACCAGATCGTGCTGTCACTCACCGCGCGGGGTCTGACCACCGGGGAAGTCGCGGCGCATTTCGCCGACGTCTATGGCGCCACCGTTTCGAGGACACGATCTCGCGGATCACCGACAAGGTGA
PROTEIN sequence
Length: 158
VTEMIGAVPEQSDHQQLVQELVERARAEGLELIGPGGLLTGLTKTVLETALEAEISEHLGYDKHDPAGRSRENSRNGTRSKTVLTEVGTVEIDVPRDRDGSFDPAIVRKRQRWLDGIDQIVLSLTARGLTTGEVAAHFADVYGATVSRTRSRGSPTR*