ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_2209_1

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 1..567

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Longispora albida RepID=UPI00037B4BB8 similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 187.0
  • Bit_score: 216
  • Evalue 1.60e-53
Type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 188.0
  • Bit_score: 169
  • Evalue 4.90e-40
Type II secretion system F domain {ECO:0000313|EMBL:ADL49576.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 188.0
  • Bit_score: 169
  • Evalue 2.40e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora aurantiaca → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 567
CTGGCGGCGCTCTCGGTGATGGGCGCGGACCTCGGCCGTGCCGTGCCGCTGTGGCTGTGCCTGATCCTCGCCGCCGCCGGATTCGTCGTCCCAGATCTGTCCATCCACGAAGAGGCCGAACAGCGGCGACTGCTGATGCGGCACACCCTCGCCGCACTGCTCGACATCGTCCCGCCCAGCCTCGCCGCCGGCGCCGGCATCGAACAGGCCCTCGGCGACGCCGCCAACATCGCCTCCGGATGGGCTGCCGACCGGATCCGCGACGCCCTGCACACCGCCCAGGTGACCCGCGCCCCGATCTGGCAACCGCTGCGCGCACTCGGCGAACAGACCGGCGTCGTCCAACTGCAGCAGCTCGCCGGCAGCCTGGAGCTCGCCGCCGACGAAGGCGCCCGGATCCGCGACGCCCTCACCCAACGCGGCGACGCGCTCGCTGAAGGACTTACCACCGACATGGAAGCCCACGCCGCCGCCGCGACCGAGCGGATGAGCGTGCCGCTGATGGGCCTCGCGGGTGTCTTCATGTTGTTCCTGATCTACCCCGCGATCGCCGGCATCCACGTCTGA
PROTEIN sequence
Length: 189
LAALSVMGADLGRAVPLWLCLILAAAGFVVPDLSIHEEAEQRRLLMRHTLAALLDIVPPSLAAGAGIEQALGDAANIASGWAADRIRDALHTAQVTRAPIWQPLRALGEQTGVVQLQQLAGSLELAADEGARIRDALTQRGDALAEGLTTDMEAHAAAATERMSVPLMGLAGVFMLFLIYPAIAGIHV*