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PLM1_60_b1_redo_sep16_scaffold_3483_8

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 5102..5818

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 Tax=Frankia sp. Iso899 RepID=UPI0003B6B78A similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 192.0
  • Bit_score: 166
  • Evalue 2.40e-38
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 179.0
  • Bit_score: 156
  • Evalue 9.30e-36
Tax=RBG_16_Actinobacteria_68_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 172.0
  • Bit_score: 160
  • Evalue 1.90e-36

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Taxonomy

RBG_16_Actinobacteria_68_21_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 717
GTGAGCGCGCCACTGCTGCGGCACCCGTCCGCCCATGTCGGCGCAGCGACGGAAAGCCGGCAGCCACCGATCAGCCGGGCTGAGAGCCGGCAGGGCGGAGACGCCGGTGGCGGCCAGGATCTGGCGCCAGAGCTGATCGACGCCTTCTGCCGTGGCGAGGACGACGGGGTCCGGGCGGTATACGCGCGCTACGCCGGTCCGGTGTACACCGCGGCGCATTCCATCCTGCGCGACCACGACCTCGCCGCCGAAGCGGTACAGGAGACGTTCGTACGCGCCTGGCGTGCCGCGGCGAAGTACGATCCGCGTCGCGGGCTGGCGCCGTGGTTGTACGTGATCGCCCGCCGGGTGGCCATCGACATCCACCGCTCCCGGCGGCATCTCGCCGCCGGCCCGCCCGACGACAACGCGATCGTGACGCTTCCCCCCGAGCTGGACACGATCTGGGAGGCGTACCAGGTCCGTGCCGCCGTGGATCGGCTGCCTGCCGACGAGCGGGCGGTCGTACGCCTGTACCACTTCGAGCAGCTCAGTCACGTCGAGATCGCGGCCCGTCTCGACATCCCAGTCGGCACCGTGAAGTCCCGTTCGTACCGCGCGCACCGCCGGCTCGCCGCGTGGCTGCGACCGCTCTGCGGCATCGAGGACGCAACCGCCGAGCCCGCTGTCACGTACCGTAAGTCAGACGACGCGGGAGTGCGGCACGATGAGTTCTGA
PROTEIN sequence
Length: 239
VSAPLLRHPSAHVGAATESRQPPISRAESRQGGDAGGGQDLAPELIDAFCRGEDDGVRAVYARYAGPVYTAAHSILRDHDLAAEAVQETFVRAWRAAAKYDPRRGLAPWLYVIARRVAIDIHRSRRHLAAGPPDDNAIVTLPPELDTIWEAYQVRAAVDRLPADERAVVRLYHFEQLSHVEIAARLDIPVGTVKSRSYRAHRRLAAWLRPLCGIEDATAEPAVTYRKSDDAGVRHDEF*