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PLM1_60_b1_redo_sep16_scaffold_3671_8

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(4791..6074)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF subfamily sigma factor Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XK33_MICPN similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 410.0
  • Bit_score: 532
  • Evalue 2.30e-148
RNA polymerase ECF subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 410.0
  • Bit_score: 532
  • Evalue 6.60e-149
Putative RNA polymerase ECF subfamily sigma factor {ECO:0000313|EMBL:BAK33529.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 410.0
  • Bit_score: 532
  • Evalue 3.30e-148

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Taxonomy

Microlunatus phosphovorus → Microlunatus → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGACCTCTGCCGGCTTAGAGGACGTGTGGCGCCGGTGTGCGCCGCACGTGCTCGCCGCGCTCGTGCGCCGCTACGGCGACTTCGACGCCGCCGAGGACGCGGTGCAGGAATCGCTGCTGGCCGCTGCGCGGCAGTGGCCGACCGACGGGATGCCGGACAACCCGAGGGGCTGGTTGATCAGGGTGGCCTCGCGCCGCCTGGTGGACCAGTGGCGCGCCGAGCAGGCCCGCAGCGACCGGGAACAGCTGATCGCCCGGCACACCCCACCCGAGGCGTTCCTCGCCCCCGCCGCCGACACCGTCGTCGGGGGTGAGCGTGACGACTCGCTGACGCTGTTGCTGTTGTGTTGCCACCCGGCGCTAACCCGCCCATCCCAGGTGGCCTTGACGTTGCGGGCGGGCGCCGGATTGAGTACCGCGCAGATCGCCCGGGCCTTCCTGGTGCCCGAGGCCACGATGGCCCAACGGATCAGCCGGGCCAAGACCCGGCTCCGACAGGTCGGGGCGCGGTTCACCGTCCCCGCGGCCGAGCAGCTGCCCGACCGGGTCGCCGCCGTCGCCCACGTGCTGTACCTGATCTTCACCGAGGGCCACACCGCCACCACCGGGACCGGCCTGACCGACATGTCCCTGGCGAACGAGGCGATCCGCCTGACCCGCCGGCTGCACCAGCACCTGCCCGCAGCTGGTGAGGTGAGCGGGCTGCTGGCGCTGATGCTGCTCACCGACGCCCGGCGAGCCGCCCGCACCCGCCCCGACGGCTCCCTGGTGCCGCTGGCGGAGCAGGACCGGACACTGTGGGACCAAACACACATCCGTGAGGGCATCTGCCTGGTCGAGCGCGCGCTGCCGACCGGGCCGGTGGGCCCCTTCCAGCTGCAGGCCGCGATTGCGGCCCTCCATGCCGAAGCCTCCCGCGCCGAGGACACCGACTGGGCCCAGATCGAGACCCTGTACCGCATGCTCCGCGACCTCACCCCCGGCCCGGTGGTCACCCTCAACCATGCTGTCGCCGTCGCCATGGTCGACGGCCCCACCGCCGCCCTGGACATGCTCGGCCCGCTGCTGCAGGACCCGCAGATGCGCCGACACCACCGGCTGCACGCCGTGCGCGCCCACCTGCTCGAGATGGACGGCCGGGTCGAGGAAGCCCGGGCCGCCTATGCCATCGCGGCTCGTCTGGCCACCAGCATCCCCGAGCAGCGTTACCTCAACACCAAGGCAGCACCGCGAGAACCCGTATGCCCGGCAAACGTCCCAATCCCGGAATATCACCCCAGATGA
PROTEIN sequence
Length: 428
MTSAGLEDVWRRCAPHVLAALVRRYGDFDAAEDAVQESLLAAARQWPTDGMPDNPRGWLIRVASRRLVDQWRAEQARSDREQLIARHTPPEAFLAPAADTVVGGERDDSLTLLLLCCHPALTRPSQVALTLRAGAGLSTAQIARAFLVPEATMAQRISRAKTRLRQVGARFTVPAAEQLPDRVAAVAHVLYLIFTEGHTATTGTGLTDMSLANEAIRLTRRLHQHLPAAGEVSGLLALMLLTDARRAARTRPDGSLVPLAEQDRTLWDQTHIREGICLVERALPTGPVGPFQLQAAIAALHAEASRAEDTDWAQIETLYRMLRDLTPGPVVTLNHAVAVAMVDGPTAALDMLGPLLQDPQMRRHHRLHAVRAHLLEMDGRVEEARAAYAIAARLATSIPEQRYLNTKAAPREPVCPANVPIPEYHPR*