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PLM1_60_b1_redo_sep16_scaffold_3724_7

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(3141..4064)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7M7_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 307.0
  • Bit_score: 500
  • Evalue 1.20e-138
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 307.0
  • Bit_score: 500
  • Evalue 3.40e-139
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB75486.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 307.0
  • Bit_score: 500
  • Evalue 1.70e-138

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGACCCGGGCCGAGCAGTTCGAGGAGCTGCGGCCGATGCTGTTCGCGATCGCCTACCGGATCCTCGGCAGCGTGGGCGAGGCCGAGGACGCGGTCCAGGAGACCTGGCTGCGCTACGAGTCCTCCCCGACACAGCCCACGTCGACCAAGGCCTTCCTCTCGGCCGTGGTGACCCGGATTTCGATCGACGTGCTGCGCTCGGCGCGCGTCCGGCGGGAGGAGTACGTCGGGCAGTGGTTCCCCGAGCCGCTGCTCACCGATCCCTATGAGGATCCGGCGCGGTCGGCGGAGCTGGCGGACTCGGTGTCGATGGCGGCCCTGTTGCTGCTCGAGCGGCTCAGCCCGCTCGAGCGGGCGGTCTTCGTGCTGCGGGAGGTGTTCGGGTTCGGCTTCCCCGAGGTCGCGTCGGCGGTGGGGCGTTCGGAGGCGGCGTGCCGACAGCTCGCGGTGCGGGCGCGGCGCCACATGGACGCGGGACGCCCTCGCTTCGAGGCGGACCGCCGGGAGCGGGATGAGCTGGCGGCGCGGTTCTTCGACGCGCTCCGGGAAGGCGACGTCGAGGGCCTGCAGGAGCTGCTCGCCGCCGACGTCCAGATGACCGGAGACGGCGGCGGCAAGGCGCCGGCGTTGACCAGGACCATCTTCGGCGCCGCGAACGTTGCCCGGGTGCTTGCCGCGGGCTTCCCCCCGCTCGTCCGGACCGGAGTGGCGGTGGAGCGGCACGAGGTGAACGGCCAGGCGGGCGCGATCCTTCGCGATCGGGACGGCAAGGTGGTCAGCACGTTGACGCTCGACGTGCTCGGCGGGCGGATCCAGACGATCCGCTCGGTGATCAACCCCGACAAGCTCGGGCACGTGGGCCCGGTCGCGGACGCGTGGGCGGTCGCCCGCGAGGTGAAGCAGGCCCGCCGGCTCAGGGACTGA
PROTEIN sequence
Length: 308
MTRAEQFEELRPMLFAIAYRILGSVGEAEDAVQETWLRYESSPTQPTSTKAFLSAVVTRISIDVLRSARVRREEYVGQWFPEPLLTDPYEDPARSAELADSVSMAALLLLERLSPLERAVFVLREVFGFGFPEVASAVGRSEAACRQLAVRARRHMDAGRPRFEADRRERDELAARFFDALREGDVEGLQELLAADVQMTGDGGGKAPALTRTIFGAANVARVLAAGFPPLVRTGVAVERHEVNGQAGAILRDRDGKVVSTLTLDVLGGRIQTIRSVINPDKLGHVGPVADAWAVAREVKQARRLRD*