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PLM1_60_b1_redo_sep16_scaffold_3814_2

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(691..2622)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SE79_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 35.5
  • Coverage: 442.0
  • Bit_score: 241
  • Evalue 1.60e-60
Sigma-70 region 2 {ECO:0000313|EMBL:EFQ82806.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.5
  • Coverage: 442.0
  • Bit_score: 241
  • Evalue 2.30e-60
putative RNA polymerase ECF subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 311.0
  • Bit_score: 206
  • Evalue 1.20e-50

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Taxonomy

Aeromicrobium marinum → Aeromicrobium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1932
ATGACCAGTGGAACTAGGCTCCAGTTCGTGGACGATGCGGCGCTCGTCGGCAGGATTCGAGCGGGCGACCGGGAGGCGTGGTCGGAGGTCTACCGGCGATACGCCAACCGGGTCCACACACTTTGCTGGTCGGTATTGCGGACCGATGAAGCTGCCGACGCCACTCAGGAGGCGTTCCTGCTCGCCCTGCAGCACCTGGCCTCGCTGCGGGACCCGGCGGCGTTGCGACCGTGGCTGTTTCGTATCGCCTGGACCGAAGCCGTCGCCCGGACCAAGAAGCGCGCCAAGTCGATCCCGGCGGACGCGATGAGCATCGACGCGGCGAGCGCCGAGCCTGGTCCCGAGGAACTCGCACAACAGCATGAGCTGCAGCGGCTGGTGTGGGCCGCCGCGGCCGGGCTGCCGCAGGAGGACAGGATCGTCCTCGAGCTCAACATCCACCAGGGCCTGGCCGGGGACGAGCTGGCCGACGCGATCGGGGTGTCGCCCGCCTACGCTCGTACCCTCGTGCAGCGGGTGCGGGCTCGCACCGACCGCGCGCTCGGCGCATTGCTTGTGGCGACCAAGGGCCAGCGGGACTGCGCCAAGCTGACGGCTGTCCTGTCCGGCTGGGACGGCAAGTTCACCCCACTGATCCGCAAGCGGGTCGCGCGCCATATCGATGGATGCCGGGTGTGCACTGACCGCCGAACCACCATGGCCAGCCCGGTTACGCTGCTCGGCTCGGCCCCAATGCTGGCTGCTCCGATCTGGGTCACCGACAAGGTGCTGGCCGCGGTCACCCCGGCGGCGCCTGCAGTGGCGGCCCATGGCTCCTCGTTGCATCTCGCTCAGCTCGGCACCCCGCGCGGGCGGATTAGCGCCCTACTGGGCGCGGGCGCCGCGGTGGCGATCGCAATCACCGCGGTCCTGGTGTGGCCGACGTCAGCGCCCGCCGAGCCGTTCACCGTCGCCGGACCAGGCGGCGGCCACGGGGACGTCCGGCTGGCCGTCGACGGCGACGGCCGGGCGTTTGTGGCCTGGTCAGACCCAGAGGTCGCGGACCAGGGCGGCTCAATGGTGCGCAACCAGACCAACGACGGCTGGACCGAGCCGGTCAACCTGTCCGCCGGGTTCCACAACCCGGGCCGGGCGATGCTACTGGCCCGGCCGGACGGGAAGATGTGTGCGTACTTCCACGGCTTCCCCGAAGGCACAGGGTGGGCTGAGACCTGGGGCCTGTACGAGCGCTGCTGGACCGGCGACAGCTGGACCGGCCCGACCCAGATGACGCGGATCGACGGTGAGCTGTTCTATCTGACCACCCACTGGGTGCCCGCGTTCGAGTCGAACGGCACCCTACACACCGCATTCGAAACACCGCCGGGCACGATCGGCGTGGACGGCCGGGTGGTCTCGGCGCCGGGCATCAACGGGTTTCCGCAGATCGTCGGAGACCGAGGCGGCCGGTTGCACGTCCTTTGGTACGCACCGAAGGCGGGTGGCATGGTGCACCGGTGGTCCGGCGACGGTGGGCAGACCTGGAGCGAGCCGGTGACGCTCGGCGACTACGGCGCCTGGGCAGCGGCGTCCGACGGTCAGGGTGGCGTCTACGTCATCGCCGCGCTCGGCGGTGATATCCCGACCCGGCGATGGACGGTCGACGCTGGCTGGAGCGCTCCGGTCAACGCCAACGGCGGGGAGCGCAACCTCATGACCTACCTCGGCCTAGCCGCCCTTGACGACGGCGGCGCGGCCGTGGCTTGGGCGCGAGACTTCACTGATCTCGTCGTCTCGGAGGGCGACAGCGGAGATGCGTTCGCGGCTGGTACCACGGTGGCCGAGACCGCCGGTGCTCGGGTGAGCACCGCGGAGCTCGCCGCCGACGGCAAGCACCTGCACCTGGTCTGGATGGCAGGAGACGGGACGATCGTCCACCTACGGCTGCGGTAG
PROTEIN sequence
Length: 644
MTSGTRLQFVDDAALVGRIRAGDREAWSEVYRRYANRVHTLCWSVLRTDEAADATQEAFLLALQHLASLRDPAALRPWLFRIAWTEAVARTKKRAKSIPADAMSIDAASAEPGPEELAQQHELQRLVWAAAAGLPQEDRIVLELNIHQGLAGDELADAIGVSPAYARTLVQRVRARTDRALGALLVATKGQRDCAKLTAVLSGWDGKFTPLIRKRVARHIDGCRVCTDRRTTMASPVTLLGSAPMLAAPIWVTDKVLAAVTPAAPAVAAHGSSLHLAQLGTPRGRISALLGAGAAVAIAITAVLVWPTSAPAEPFTVAGPGGGHGDVRLAVDGDGRAFVAWSDPEVADQGGSMVRNQTNDGWTEPVNLSAGFHNPGRAMLLARPDGKMCAYFHGFPEGTGWAETWGLYERCWTGDSWTGPTQMTRIDGELFYLTTHWVPAFESNGTLHTAFETPPGTIGVDGRVVSAPGINGFPQIVGDRGGRLHVLWYAPKAGGMVHRWSGDGGQTWSEPVTLGDYGAWAAASDGQGGVYVIAALGGDIPTRRWTVDAGWSAPVNANGGERNLMTYLGLAALDDGGAAVAWARDFTDLVVSEGDSGDAFAAGTTVAETAGARVSTAELAADGKHLHLVWMAGDGTIVHLRLR*