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PLM1_60_b1_redo_sep16_scaffold_4357_4

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(4056..5261)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor Tax=Rhodococcus opacus RepID=UPI00029CAD7B similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 401.0
  • Bit_score: 564
  • Evalue 6.80e-158
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAF50619.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 401.0
  • Bit_score: 566
  • Evalue 1.90e-158
Uncharacterized protein similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 401.0
  • Bit_score: 564
  • Evalue 1.90e-158

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Taxonomy

Rhodococcus wratislaviensis → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
TTGACCGGACCCGCCGCTGCCGAGGACCTGCTGCGCGAGCTGGCGCCGCAGGTCCTCGGCGTGGTGATCCGCCGTTTCGGCGACTTCGACGCGGCCGAGGACGCCGTCCAGGAGGCGCTCCTCGCGGCGGCCCTGCAGTGGCCGTCAGAGGGCACGCCGGACAATCCTCGCGGCTGGCTGATCCAGGTCGCGATCCGCCGCATGACCGACCAGATCCGCAGCGACACGGCCCGTCGACGTCGCGAGGATGCGGTTCTCCAGGAACCGCCCGGCGGCGAGGTGCTCGACCGCGACGACACGCTCGTGCTGCTGTTCATGTGCTGCCACCCGGCGCTCAGCCAGACATCGGCGATCGCGCTCACGCTGCGGGCCGTCGGCGGCCTGGCCACCGCCGAGATCGCCAGCGCATTCCTCGTTCCCGAGACGACCATGGCCCAGCGCATCAGCCGTGCCAAGCAGCGGATCAAGAGTTCCGGCGTACCGTTCCGGATGCCCACCGCCGACGAGTGGGCGCAGCGACTCCGCTCCGTGCTCCACGTCCTGTACCTCATCTTCAACGAGGGCTACACCAGCACCGCCGGCGCCGAACTGCAGCGCGTCGAGCTGTCCCATGAGGCGATCCGGCTGGGCAGGGCAGTGCACGGCCAGCTCCCGGACGATCCCGAAGCCGCGGGCCTGCTCGCGCTCATGCTGCTCACCGACGCGCGGCGGCCCGCCCGCAATGGCCCTCACGGTGAGCTGATACCGCTCGCCGAGCAGGACCGCAGCCGCTGGGACCGGACCCTGATCAACGAGGGCAGCGGCCTGATCATGGCCGCGTTCGCGAAAGAGGCCATCGGTCCGTACCAACTGCAGGCCGCGATCGCCGCCGTCCACGACGACGCGAGGCACGCCGACGAAACCGACTGGCCGCAGATCCTCGGCCTCTACGGCCTGCTGGAACGGATGACCGGCAACCCGATGGTGTCGCTCAACCGGGCCATAGCCGCGGCTATGGTCGAGGGCCCCGCGGCCGGGCTGAAGCTCCTCGACGACCTCGACGAGCGGCTCGCCGGCCACTACCGCCTCGATGCGGTGCGCGCGCACCTGCTGGAGATGTCCGGTGATCCGCAGGCCGCGATCAAGCACTACCAGGCGGCGGCGAGCCGGACGACGAGCCTGCCGGAGCAGCAGTACCTGACGATGAAGGCCGCGCAGCTCCGGTAG
PROTEIN sequence
Length: 402
LTGPAAAEDLLRELAPQVLGVVIRRFGDFDAAEDAVQEALLAAALQWPSEGTPDNPRGWLIQVAIRRMTDQIRSDTARRRREDAVLQEPPGGEVLDRDDTLVLLFMCCHPALSQTSAIALTLRAVGGLATAEIASAFLVPETTMAQRISRAKQRIKSSGVPFRMPTADEWAQRLRSVLHVLYLIFNEGYTSTAGAELQRVELSHEAIRLGRAVHGQLPDDPEAAGLLALMLLTDARRPARNGPHGELIPLAEQDRSRWDRTLINEGSGLIMAAFAKEAIGPYQLQAAIAAVHDDARHADETDWPQILGLYGLLERMTGNPMVSLNRAIAAAMVEGPAAGLKLLDDLDERLAGHYRLDAVRAHLLEMSGDPQAAIKHYQAAASRTTSLPEQQYLTMKAAQLR*