ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_6258_3

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(3290..3973)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator Tax=Saccharopolyspora spinosa RepID=UPI0002379F1E similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 222.0
  • Bit_score: 315
  • Evalue 3.10e-83
Two-component system response regulator {ECO:0000313|EMBL:CCH20638.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 221.0
  • Bit_score: 307
  • Evalue 1.50e-80
putative two-component system response regulator similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 223.0
  • Bit_score: 303
  • Evalue 2.60e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora lupini → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGACGATCAGAGTGCTGGTCGCCGATGATCAGCCGCTGGTGCGCGGCGGCTTCGCCGTCTTCATCAACGCCGCACCCGACCTGCAGGTGGTCGGCGAGGCGGCCACCGGCCGCGAAGCCATCGAGCTGGCCAGAACGACCCGCGCCGACGTGGTCGTCATGGACATCCGCATGCCCGATCTGGACGGGCTGTCCGCCACCCGCCTGATCAGCGCCGATGAAGATCTCGCGGGCGTACGAGTGCTGATCCTGACCACGTTCGAAGTCGACGAGTACGTATTTCAGGCGCTGCGCGCTGGCGCCAGTGGTTTCCTGGGCAAGAGCGCCGAACCTGATGAACTGCTCGACGCGATCCGTACTGTGCATCGCGGCAACGCGCTGCTGTCACCGGCCGCCACGAAGAGTCTCATCGCCCGCTTCCTCGCCCAACCGGACCACCGCCGAACATCCACCCCGGAACTGCTCGCCACGCTCACCGACCGGGAACGCGAAGTCCTCGCGCTGGTCGCTGCCGGCATGTCCAATGAGGACATCGCCGCGCAGCTCGTCGTCAGTCCACACACCGCCAAGACGCACGTCAACCGGGCCATGACGAAACTCGGCGCCCACGACCGCGCCCAGCTCGTGATCGCCGCCTACGAGGCAGGACTCGTACGACCTGCCGCACGGCAAACGCCCATCTAA
PROTEIN sequence
Length: 228
MTIRVLVADDQPLVRGGFAVFINAAPDLQVVGEAATGREAIELARTTRADVVVMDIRMPDLDGLSATRLISADEDLAGVRVLILTTFEVDEYVFQALRAGASGFLGKSAEPDELLDAIRTVHRGNALLSPAATKSLIARFLAQPDHRRTSTPELLATLTDREREVLALVAAGMSNEDIAAQLVVSPHTAKTHVNRAMTKLGAHDRAQLVIAAYEAGLVRPAARQTPI*