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PLM1_60_b1_redo_sep16_scaffold_7958_4

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(1814..5182)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, winged helix family Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEZ9_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 1131.0
  • Bit_score: 1045
  • Evalue 0.0
winged helix family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 1131.0
  • Bit_score: 1045
  • Evalue 0.0
Transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADB74689.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 1131.0
  • Bit_score: 1045
  • Evalue 0.0

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3369
GTGGTGCGGATCGGTCTGCTCGGTGGTGTCCGCGCCGTTACCGAAGACGGCCAGCCGATCGACATCGGTCCGGCGAAGACGCAGACGGTGCTCGCGGCGCTGGCCTTGTCGCCTGGGACACCGCTGGCGGTGTCGCGCCTGGTGGAGCTCGTGTGGGGTGACGCGCCCCCGCGAACGGCGCACAAGACTCTGCAGTGGCACGTAGCGCGACTGCGCAAGGGCCTTGGTTCCGCGACGATCGTGCGGGTCGGTGCCGCGTACCGCCTCGACGTAGCGCCTGACGCGGTCGACGTGACGCGCTTTCAGCGGCACTTGCGCGAGGGTGATCTCGCCGCGGCCCTCGCGCAGTGGGGCGGAACTCCCCTGGCCGGTCTGGACGCGCCCGGCCTCGCGGCGGCGGTGGCCGGTCTGACCGAACAGTGGCTGAGCGCTGTCGAGGCCGACCTTGAACGCCGTGTCGAGTCCGACCCGCGGGGGGTTATCGGTTCATTGGCGGAGCTCGCGGAGCGTTATCCCCTCCGCGAGGGTTTCTGTGCCCTGCTGATGACGGCTCTGTACCAGGTGGGCCGCCAGGCCGACGCCCTCGCGGCCTTTCGGCGGGCCCGGCACCATCTCGTCACGCAGCTCGGTGTCGAACCTGGGCCGGCGTTGCGCGAGCTCGAGTCGCGGATCCTCGACCACGACGAGCGGCTGCGCGGACGTGCCGCACCGGAGCACGCGCCGCCACGCCGTCCGAGCGGGACGGTAACCTTCGGCCTCGCGCAGGTCGCCCACTCGGCGACCGGCTGGGCGACGCATCGGGCGGCAGCCGCGCCGATGGCCCGCCTGGACCATCTCGTCCGGGCGGCGGCGGACCGGCATGGTGGCTACGTCTTCGCTGCCGGCGCCGAGTCGGTCGGGGTGGCCTTCCACCGAGCCGATGACGCCGCCGCGTGGGCGGCACGGCTGCAGCGGGCAGCTGCCAGCGAACGCTGGCCGGACGGCGCCGAGCCAGGCGTGCGGATCGGCCTGCACACCGGCGAGTCCGAGGAAGTGGCCACGGGGTACGTCGGCGCCGCGGTGGATCTGGCCGCGCGTATCGCTGCCGCTGGCCATGGCGGACAGACCCTGGCTTCGGGGGCAACGGCCGGCCTTCTGGACCGGAGCGACCTGCACGATCTCGGGTGGTTCTGCCTGGACGGCGTTGCTGGCGACCAGCGCATCGTCCAGATCGGCGCGGGCGAGCACGCACCGATACGGTTACCCGGGATCCGGCGGGGCTACCTACCCCTTCGCGTTGGCCGCCTCATCGGCCGCGACGGGGACCTGCGGGCCGCCGCCGACGCGCTCGCGCGGTCCCCGGTCGTGACCTTGGTGGGACCGGGAGGGATCGGCAAGACCCAGCTCGCGCTGGCGGCGGCCCGCACGGCGGCAGCCGATCACGGGTGGGACGGGTGGCTGATCGAGTTGGCGGAGATCGCATCGCCGGCCGACGTGCCCCGCGCGGTTGCCGACGTGTTGGGAGTCGCGCAGCGTCCGGGACACGCCCTGACCCAATCGATCGTCGCGGTCCTGCGGTCGCGCCGGGCATTGTTGGTCATCGACAACTGCGAGCACGTCATTGACGGCGCGGCCGAGCTCGTACAGGCCATCGTGGCGGGCTGCTCGCAGGTGCGCGTGCTGGCCACTGCACGGGAACGTCTCGCTGTCGCAGGCGAACAGGTGCTGGTCGTGGGACCACTGGATCCGGCCGCCGGCGCCGAGCTGTTCCATGCCCGCGCGCTCGCCGCCGATCGGACCTACGATGCGCGTGCGCATCATCGCTACGTCGAGGAGATCTGCCGGCGGCTCGATGGCATACCGCTGGCCATCGAGTTGGCCGCCGCTCGGACGATAAGCCACCGGCCGGTCGACCTCGTCGCCCGGCTCAACGATCGTCTCCGGGTGACCGGTGGCCGCCGGACCGGCGCCGCGCGGCATCGCACGTTGCGGGCAGCCATCCAATGGTCCTACGACCTGCTCACGCCCGCCGAACAAACACTGTTCCAACGCTTGTCCGTCTTCAACGCACCGTTCGACCTCAGCGCGGCGGAAGCCGTCGCCGACGAGCAGGACGTCGACGACCTTCTGGGCGACCTGGTCGAGCGGTCGATGGTCACCGTCGACTCCGGCCCGTTGGGCCGGCGTTTCCGGCTGCTGGAGACCATGCGCCAGTTCGCCGCCGAGCACCTGCGTGAGCGTGGGCATACCGACCTGGCCGCCGGACGCCACGCGCGTTGGTGCGTCCGCGAAGTCACCCACATCCACCGCCTGCTCACCGGTCCGGGCGAGATCGAGGGCGTCGCTCGCCTCGGCGACCTGTGGGCGAATCTGCGTGCGGCCCTCACGTGGGCGTGTGCGGCGGGAGACCCGCGACTGGCCGATGCGCTGGTCCGGCCGGTCGTCACGGAGCTCCCCCTGCGGGGGCGGCAGGAGATCGGCCTCTGGGCCGAGCACATCCTGGCCATAATGTCGGCGGAGGACCAAGAGGACCAGGACGTGCGTGCCTTCTGGCTCGTCTGGGTCGCCGAACGTTACACCCAGAACGCCAACCCGGCGGGCTACCGCCACGTGGCGGACCGGTGCGGCGAACAGGGCCGGCCGCTGAGCCGCTATGCGCACGCGTACGCCTGCGGCGACGGCGAGGCCCTGTGGCGGTGCCTGCCGGACGCCGTGGCCGATCTACGTCGCCAGGATGAGCAATATCTGGCGGCGTTCCTCGAAATGACGTCGGCGGGGACGCTGCTGGGCATCGGGCGTTTCGAGCAGGTCGATACGTCAGTCACGGCCCTGGCGGATCGGTATCGGATCCACGGCCCGCCAACCCTCCTGCACTGGGCGCTGCAGACCCTCGGCTACTCCGCCTCGTTTCAGGGCCGGCACGACGACGCCGATCGGTACTTCGATGAAGCGGCCCGCGTCGACCTCCCCACGGGCACGCTGTCGGCCAACAAAACCACCGAAGCCAGGTCCGCGTTCCGGCGAGGCGAGCGGCTGCGAGCCTTTCAACTCCTGCGGTCCCACGTCGACGAACTGATCGAGACCGACAACGTGATCGCCGCCAGCGTCGTCTGCATCGAATTCATCAACATGATGGCCGCGGTCGACCGGATCGCCGAGGCGGCCCACATGCTCGGGTATCTCGAGGCGGCCAACGACTTCGGCGCCCTGGCCGCCCGAACTCTCGTCACCGAAGCCACCAACAAGATCGCTGCCACCGTCCGGCACGGCTCAGATGCGACGCCGGCATCCGTGCGCCACATCGACGACCGCGCCGCCCTCAAGTACATGCGTGACGTCCTCGTCGAACTCGCTCGACCTGACGTGCAGCCCGAAACCTCGGCCAGCTGA
PROTEIN sequence
Length: 1123
VVRIGLLGGVRAVTEDGQPIDIGPAKTQTVLAALALSPGTPLAVSRLVELVWGDAPPRTAHKTLQWHVARLRKGLGSATIVRVGAAYRLDVAPDAVDVTRFQRHLREGDLAAALAQWGGTPLAGLDAPGLAAAVAGLTEQWLSAVEADLERRVESDPRGVIGSLAELAERYPLREGFCALLMTALYQVGRQADALAAFRRARHHLVTQLGVEPGPALRELESRILDHDERLRGRAAPEHAPPRRPSGTVTFGLAQVAHSATGWATHRAAAAPMARLDHLVRAAADRHGGYVFAAGAESVGVAFHRADDAAAWAARLQRAAASERWPDGAEPGVRIGLHTGESEEVATGYVGAAVDLAARIAAAGHGGQTLASGATAGLLDRSDLHDLGWFCLDGVAGDQRIVQIGAGEHAPIRLPGIRRGYLPLRVGRLIGRDGDLRAAADALARSPVVTLVGPGGIGKTQLALAAARTAAADHGWDGWLIELAEIASPADVPRAVADVLGVAQRPGHALTQSIVAVLRSRRALLVIDNCEHVIDGAAELVQAIVAGCSQVRVLATARERLAVAGEQVLVVGPLDPAAGAELFHARALAADRTYDARAHHRYVEEICRRLDGIPLAIELAAARTISHRPVDLVARLNDRLRVTGGRRTGAARHRTLRAAIQWSYDLLTPAEQTLFQRLSVFNAPFDLSAAEAVADEQDVDDLLGDLVERSMVTVDSGPLGRRFRLLETMRQFAAEHLRERGHTDLAAGRHARWCVREVTHIHRLLTGPGEIEGVARLGDLWANLRAALTWACAAGDPRLADALVRPVVTELPLRGRQEIGLWAEHILAIMSAEDQEDQDVRAFWLVWVAERYTQNANPAGYRHVADRCGEQGRPLSRYAHAYACGDGEALWRCLPDAVADLRRQDEQYLAAFLEMTSAGTLLGIGRFEQVDTSVTALADRYRIHGPPTLLHWALQTLGYSASFQGRHDDADRYFDEAARVDLPTGTLSANKTTEARSAFRRGERLRAFQLLRSHVDELIETDNVIAASVVCIEFINMMAAVDRIAEAAHMLGYLEAANDFGALAARTLVTEATNKIAATVRHGSDATPASVRHIDDRAALKYMRDVLVELARPDVQPETSAS*