ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_11916_1

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(369..704)

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase (EC:2.7.7.49) similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 110.0
  • Bit_score: 99
  • Evalue 4.80e-19
RNA-directed DNA polymerase Tax=mine drainage metagenome RepID=T1CN97_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 102.0
  • Bit_score: 125
  • Evalue 1.70e-26
Group II intron, maturase-specific domain {ECO:0000313|EMBL:KJE76047.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 102.0
  • Bit_score: 173
  • Evalue 1.30e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ferrimicrobium acidiphilum → Ferrimicrobium → Acidimicrobiales → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGCACAAGTGGCCGTCGACGCGGGCCATGGCCTCCATCCGGGCCAAGGTCCGCGACCTGACCGCTCCGCGGCAGGTCGGGCTGCCAATGGAAGTGGTGGTCGAGCAACTCAGCCCCGTGCTGCGGGGCTGGGGCGCCTACTTCCGCCAGGGCAACTCCTCGGCGAAGTTCGGCGCCATCGACTCCTACGTCCACGAACGGATGGCCATCCTGGCCAGCAGGAAATACCGCCGCAAGGGGTTCAACTGGACAGACCGCTACACCTGGGGCTGGCTGGGGAACCTGGGGATTTACCGGCTCGAAGGAACGGTGCGCTACCCGGCTGCGAATGCCTGA
PROTEIN sequence
Length: 112
MHKWPSTRAMASIRAKVRDLTAPRQVGLPMEVVVEQLSPVLRGWGAYFRQGNSSAKFGAIDSYVHERMAILASRKYRRKGFNWTDRYTWGWLGNLGIYRLEGTVRYPAANA*