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PLM1_60_b1_redo_sep16_scaffold_12389_4

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(2805..3839)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036B1007 similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 338.0
  • Bit_score: 427
  • Evalue 1.10e-116
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EMD24835.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 311.0
  • Bit_score: 407
  • Evalue 1.70e-110
RNA polymerase sigma70 factor similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 340.0
  • Bit_score: 399
  • Evalue 5.40e-109

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Taxonomy

Amycolatopsis azurea → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
GTGGTGAGCGAGGCCACGCTGGTTCGCGCCCAAGCGGGAGACCAGCAGGCGTTTCGCGAGCTCACTGACCCGCACCGGCGCGAGCTGCAGCTGCACTGCTACCGGATTCTCAGCTCGGTGCAGGACGCCGAGGACATGCTGCAGGAGACTCTGCTGGCGGCCTGGCGAGGCCTGGCGCGCTTCGAAGGGCGGGCTTCGCTGCGCGCGTGGCTGTACCGCATCGCGACCAACCGCTGCCTCAACGCGCTGCGCGACGCCGGGCGACGGCCACCGCCGCCACCGGTCGCCCCGTTCGAGCCGCCTGAGCCCACCCGTCACGGCGAGCCGACCTGGCTGCAGCCCTACCCGGACGTGCTGCTGGAGGGGATCGCGGACACCTCGCCTGGGCCGGAGGCGCGCTATCAGAGCAGAGAGGCGATCGAACTGGCGTTCGTTGCCGGGCTGCAGCAGCTGCCGCCGCGCCAGCGGGCCGCGCTCGTGCTCCGCGACGTGCTCGGCTTCCGCACCATGGAGGTGGCGGCCATGCTCGACAGCAGCGAGGCTTCAATCAAAGGCGCCCTGCGCCGTGCCCGCGCGACCCTCGACGAATGCCGACCAGCCGCAGATCACCAGCGGACACCACCGCCGCGCTCAGCGCGCGAACGCGAACTCACACGACGCTTCGCCGACGCCTTCCAGGACGACGACATCGACGCCATCATCGCGCTGCTGACCGACGACGCGTGGCTCACCATGCCCCCGGCCCCACACGAGTACCAGGGTGCAGTGGCGATCGCGTCCTTCCTGCGCACCAGCGCCACCTGGCGTGGTGGACGCCGACTCCGGCTCGTGCCCACCCGCGCCAATACCCAGCCCGCCTTCGGCTGCTACCTGGGCGACGCGCGGGTACCGATCGCGCAGGCCGCCGGGCTGATCGTGCTCACACTCGATGACGACCGGATCTCCGCCATCACCCGCTTCCTCGACAACAACGTCCTGCACCACTTCGGACTCCCGCAAACCCTGCCCAATAACTCGAACTCGCCCACGCCGTGA
PROTEIN sequence
Length: 345
VVSEATLVRAQAGDQQAFRELTDPHRRELQLHCYRILSSVQDAEDMLQETLLAAWRGLARFEGRASLRAWLYRIATNRCLNALRDAGRRPPPPPVAPFEPPEPTRHGEPTWLQPYPDVLLEGIADTSPGPEARYQSREAIELAFVAGLQQLPPRQRAALVLRDVLGFRTMEVAAMLDSSEASIKGALRRARATLDECRPAADHQRTPPPRSARERELTRRFADAFQDDDIDAIIALLTDDAWLTMPPAPHEYQGAVAIASFLRTSATWRGGRRLRLVPTRANTQPAFGCYLGDARVPIAQAAGLIVLTLDDDRISAITRFLDNNVLHHFGLPQTLPNNSNSPTP*