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PLM1_60_b1_redo_sep16_scaffold_16648_2

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: comp(398..982)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 199.0
  • Bit_score: 166
  • Evalue 2.80e-38
2''''-5'''' RNA ligase Tax=Salinispora RepID=UPI0002DFF172 similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 188.0
  • Bit_score: 164
  • Evalue 9.90e-38
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 188.0
  • Bit_score: 161
  • Evalue 2.40e-37

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Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 585
GTGGCGGTGCGTCGGCTCTTCGTGGCGGTAGACCCTCCGCCGGAGGCCGTGTCACACCTCGGCGAGGTCGTTGACACGCTGGCGGTGAGCCGAGCGAACGCTCCGGGCCGATCGACCCGGCTGGCCGCCCGCGACCGGTGGCACGTCACGCTGGTGTTCCTCGGCGACGTGCGGGAAGAGCGGGTCGAGGACGCCGCCGGGGCCATGAGCCGGGCAGCCGCAGCCGTCAGCGGACCGATCCGCCTCTGTTTCGCGGGCGGCGGGAGGTTCGGTAGGGGTAGGTTCACGATCCTCTGGGCCGGTGTCGGTGGCGATATCGCCGCGCTACGCGCGCTGGCCGCCGCGGTGCGTCGAGAGGTGCGGCGGTCGCGCCTGCCGCACGATGACAAGCCGTTCCGGCCTCACCTGACGATCTCCCGACCGGGCACCCGCGTCGAGCCGGATCTGATCGCCGCCGACGTGGAGACGCTGGCCTCCTACGCTGGTCCGGAATGGACAGTCGACGCGGTGCACCTCATCGCCAGCGAGCTCGGTCCACGGCCCCGCCACACGCGGATGGCGTCATCGCGCCTGAGCCCGAGCTGA
PROTEIN sequence
Length: 195
VAVRRLFVAVDPPPEAVSHLGEVVDTLAVSRANAPGRSTRLAARDRWHVTLVFLGDVREERVEDAAGAMSRAAAAVSGPIRLCFAGGGRFGRGRFTILWAGVGGDIAALRALAAAVRREVRRSRLPHDDKPFRPHLTISRPGTRVEPDLIAADVETLASYAGPEWTVDAVHLIASELGPRPRHTRMASSRLSPS*