ggKbase home page

PLM4_90_b2_sep16_scaffold_2896_4

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_54_9

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(2964..3170)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock-like protein cspLA bin=GWB2_Nitrospirae_rel_47_37 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 68.0
  • Bit_score: 110
  • Evalue 4.50e-22
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 67.0
  • Bit_score: 104
  • Evalue 1.20e-20
Tax=RBG_16_Deltaproteobacteria_54_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 68.0
  • Bit_score: 139
  • Evalue 9.80e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_54_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGGCCAATGGCACAGTAAAGTGGTTTAATAACGCCAAAGGTTACGGTTTTATCACGATCGAGGATGGCAAGGATGTGTTTGTCCACCATTCCGCCATCCAGAGCAAGGATTTTGGATTCAAGTCCCTTGCCGAGGGTGATAAGGTCAGCTTTGATGTCGAGCAAGGCCCGAAAGGCCCCAGCGCCGTCAACGTTGTGAAGCTGTAA
PROTEIN sequence
Length: 69
MANGTVKWFNNAKGYGFITIEDGKDVFVHHSAIQSKDFGFKSLAEGDKVSFDVEQGPKGPSAVNVVKL*