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PLM4_90_b2_sep16_scaffold_439

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_439_1
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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84..1364
DNA (1281bp) protein (427aa)
Trigger factor Tax=Geobacter uraniireducens (strain Rf4) RepID=TIG_GEOUR
trigger factor
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_439_2
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1376..2005
DNA (630bp) protein (210aa)
ATP-dependent Clp protease proteolytic subunit bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
ATP-dependent Clp protease, proteolytic subunit ClpP
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_439_3
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2005..3255
DNA (1251bp) protein (417aa)
ATP-dependent Clp protease ATP-binding subunit ClpX bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Clp protease ATP-binding protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_439_trna_1
unknown

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3302..3374
DNA (73bp)
transferRNA Val
PLM4_90_b2_sep16_scaffold_439_trna_2
unknown

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3454..3527
DNA (74bp)
transferRNA Asp
PLM4_90_b2_sep16_scaffold_439_4
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3611..5041
DNA (1431bp) protein (477aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4M5_DESTA
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b2_sep16_scaffold_439_5
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5038..7200
DNA (2163bp) protein (721aa)
4-alpha-glucanotransferase bin=GWC2_Nitrospirae-rel_56_14 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
4-alpha-glucanotransferase
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b2_sep16_scaffold_439_6
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7322..7663
DNA (342bp) protein (114aa)
Putative uncharacterized protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LFG1_SYNFM
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b2_sep16_scaffold_439_7
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7767..8600
DNA (834bp) protein (278aa)
glycosyl transferase family 2 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B65B6E
family 2 glycosyl transferase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_439_8
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8704..9669
DNA (966bp) protein (322aa)
ParB domain-containing protein nuclease; K03497 chromosome partitioning protein, ParB family bin=bin1_lowGC species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
ParB domain-containing protein nuclease
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b2_sep16_scaffold_439_9
unknown

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9672..9842
DNA (171bp) protein (57aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_439_10
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9948..11060
DNA (1113bp) protein (371aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B38C4C
DNA repair photolyase-like protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_439_11
unknown

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11076..11174
DNA (99bp) protein (33aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_439_12
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11197..12003
DNA (807bp) protein (269aa)
3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase Tax=Bacillus smithii 7_3_47FAA RepID=G9QMN2_9BACI
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b2_sep16_scaffold_439_13
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12062..13285
DNA (1224bp) protein (408aa)
3-ketoacyl-CoA thiolase, Acetyl-CoA acetyltransferase Tax=Smithella sp. ME-1 RepID=V4FHE8_9DELT
thiolase
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b2_sep16_scaffold_439_14
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

13658..13927
DNA (270bp) protein (90aa)
Prevent-host-death family protein bin=GWF2_Ignavibacteria_35_20 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
prevent-host-death family protein
Tax=RBG_13_Nitrospirae_41_22_curated
PLM4_90_b2_sep16_scaffold_439_15
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13917..14222
DNA (306bp) protein (102aa)
RelE/StbE family addiction module toxin bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
translation repressor RelE
Tax=CG_Desulfob_01
PLM4_90_b2_sep16_scaffold_439_16
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14358..14633
DNA (276bp) protein (92aa)
Hypothetical cytosolic protein bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
cytoplasmic protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_439_17
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14692..14829
DNA (138bp) protein (46aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Displaying 19 items

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