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PLM4_90_b2_sep16_scaffold_1687

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_1687_1
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

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comp(3..323)
DNA (321bp) protein (107aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RBG_13_Chloroflexi_46_14_curated
PLM4_90_b2_sep16_scaffold_1687_2
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

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comp(459..656)
DNA (198bp) protein (66aa)
isopropylmalate/isohomocitrate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RBG_13_Chloroflexi_46_14_curated
PLM4_90_b2_sep16_scaffold_1687_3
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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comp(841..1473)
DNA (633bp) protein (211aa)
iorB3; IorB3 (EC:1.2.7.8); K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
indolepyruvate ferredoxin oxidoreductase
Tax=RBG_13_Chloroflexi_60_13_curated
PLM4_90_b2_sep16_scaffold_1687_4
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(1470..3389)
DNA (1920bp) protein (640aa)
Indolepyruvate ferredoxin oxidreductase, alpha/beta subunit Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C3C9_DESTA
indolepyruvate ferredoxin oxidreductase, alpha/beta subunit
Tax=CG_Dehalo_02
PLM4_90_b2_sep16_scaffold_1687_5
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3410..3706)
DNA (297bp) protein (99aa)
Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain protein bin=GWC2_Syntrophobacterales_56_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
F420-dependent glutamate synthase
Tax=BJP_IG2069_Syntrophobacterales_46_30
PLM4_90_b2_sep16_scaffold_1687_6

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comp(3648..4496)
DNA (849bp) protein (283aa)
Coenzyme F420-reducing hydrogenase, beta subunit Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C3D0_DESTA
Marine sediment metagenome DNA, contig: S01H1_S30988 {ECO:0000313|EMBL:GAG36266.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
coenzyme F420-reducing hydrogenase, beta subunit
PLM4_90_b2_sep16_scaffold_1687_7
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4600..5382)
DNA (783bp) protein (261aa)
IclR helix-turn-helix domain protein Tax=delta proteobacterium NaphS2 RepID=D8FE53_9DELT
IclR helix-turn-helix domain protein {ECO:0000313|EMBL:EFK05962.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
IclR family transcriptional regulator
PLM4_90_b2_sep16_scaffold_1687_8
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5813..7033)
DNA (1221bp) protein (407aa)
Major facilitator superfamily MFS_1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4THH8_CALNY
major facilitator superfamily protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_1687_9
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7175..7333)
DNA (159bp) protein (53aa)
Rubredoxin Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R870_THETN
rubredoxin
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b2_sep16_scaffold_1687_10
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7414..7860)
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Desulfobacter postgatei 2ac9 RepID=I5B6P9_9DELT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_1687_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8087..8923
DNA (837bp) protein (279aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BY29_ANAMD
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1687_12
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8995..9228
DNA (234bp) protein (78aa)
Putative AsnC family transcriptional regulator Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM31_9BACT
AsnC family transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1687_13
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9622..10293
DNA (672bp) protein (224aa)
Peptidase Tax=planctomycete KSU-1 RepID=I3II87_9PLAN
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_1687_14
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10357..12045)
DNA (1689bp) protein (563aa)
Strongly similar to DNA polymerase beta family Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q353_9BACT
PHP domain-containing protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Displaying 14 items

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