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PLM4_90_b2_sep16_scaffold_5363_2

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 1313..2944

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD Tax=Geobacter metallireducens RepID=Q39YN6_GEOMG similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 543.0
  • Bit_score: 537
  • Evalue 1.20e-149
RNA polymerase sigma70 factor similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 569.0
  • Bit_score: 538
  • Evalue 1.20e-150
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 542.0
  • Bit_score: 838
  • Evalue 4.60e-240

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Taxonomy

RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1632
TTGGAAGAACGGGGTTCAGAAAAACCTTTTTTCTTTGACCCAGGCGAAGATCCCATCCTCCTATCCGAAGAAATGGACATGGATATCGTTGGCGAGGTCCCGGGAATTGAAACGGAGGATGAGAACCATCAGCTGACAGAGGAGGAAGAACCTCCTGAGGTGGGATATGTGGGTCTTCCTGGGAAGACGATCGATCCTGTCCGGATTTACCTCAAGGAGATGGGATCCTTCCCATTATTGACCCGTGAGGGGGAAGTAGAAGTGGCAAAGAGGATCGAAAGCGGACAGCAGGAGGTCCTCCGTGTGGTTCTCAACTGCCCCATTGCGATCAAAGAAATCATTCACCTTGGAAAGGCTCTACGAACCGGAAAGACTAAAATCAGTGAGGTCACCCATGAGGTCGACGATGAGGAGACGAATATTAAAGTAGAGAGGCTTCATGAAAGAAGGGTCCTCCACCTCATTAATAAAATCCGGAAGGGGGCAAGTAAGATTCAGCTTCTTCAGAAGAAGCTGGAAATCATGAAAAAGAAACCCTCAAAAGATAGGATAGGGGGAGAGATTTGTAAAAAACAGGGTGAAATACTCAATACCTTTAAACAGATCAACTTCAGAGTAGAACAGATCAACAGGATCATTCAGAGGTTGAAACAGTGGGACATCCAAATAGATAAGACGCAAAAGGAAGTCAAAAAATATCAAGGAAACTTAGGACCATCCACACGGGGAGCCAAAAAGTCTCTGAAGACAAAGAAGGGAGACCTGAAACGGAAAGAATTGGAGGAGATGAATAGGATCGCCCGGAATATCAAACGTAGAATAAGCAGGATGGAGGCAGAGTGTGGCCTTTCTTCGAAGCAGCTTAAAGAGGCCCTCAGGGCGATAGAAAATGGAGAGGCCAAGATTAAAGGGGCAAAGGCTGAATTGATCAAGGCCAATCTGAGATTAGTCATCTCCATAGCCAAGAGATATATGAATCGGGGGCTTCAGTTTCTGGATTTGATTCAAGAGGGAAATATTGGGTTAATGAGGGCCGTTGAAAAGTTCGAATATCAAAGGGGCTATAAGTTCGGAACCTATGCTACGTGGTGGGTTCGTCAGGCCATCACCCGAGCCATTGCTGATCAGGCACGCACCATTCGCATCCCTGTCCATATGATCGAGGTCATCAACAAACTAAACCGAACCTCTCGATCCCTCGTTCAGGAGATGGGGAGAGAACCCACCATGGAAGAGATCGCTAAAAAAATGGGTGTGCCTCTTCATCACGTTCAGAAGGTTTTAAAGGTCAGTAAAAAAACCATTTCACTTGAAACCCCCATCGGCGAGGAGGAGGATAGCCGTCTGGAGGATTTTATTGAAGACAAGGGGTCTATTTCTCCCCAGGATGCGGCCATCAATGCCAATCTGGCAAAACAGACTCAAAGAGTCCTTTCCACCTTGGATAAGCGGGAAGAAAAGATTTTAAGGATGCGATTCGGAATTGGGGAGAAACACGACCATACCCTCGAGGAGGTTGGACAGGACTTTAACGTGACACGAGAACGAATCCGACAGATTGAAGAAAAAGCCTTAAGGAAGTTGAAACATCCCAGCCGTGCAGAGAAGCTTAGGAGTTTTATCGAATATTAA
PROTEIN sequence
Length: 544
LEERGSEKPFFFDPGEDPILLSEEMDMDIVGEVPGIETEDENHQLTEEEEPPEVGYVGLPGKTIDPVRIYLKEMGSFPLLTREGEVEVAKRIESGQQEVLRVVLNCPIAIKEIIHLGKALRTGKTKISEVTHEVDDEETNIKVERLHERRVLHLINKIRKGASKIQLLQKKLEIMKKKPSKDRIGGEICKKQGEILNTFKQINFRVEQINRIIQRLKQWDIQIDKTQKEVKKYQGNLGPSTRGAKKSLKTKKGDLKRKELEEMNRIARNIKRRISRMEAECGLSSKQLKEALRAIENGEAKIKGAKAELIKANLRLVISIAKRYMNRGLQFLDLIQEGNIGLMRAVEKFEYQRGYKFGTYATWWVRQAITRAIADQARTIRIPVHMIEVINKLNRTSRSLVQEMGREPTMEEIAKKMGVPLHHVQKVLKVSKKTISLETPIGEEEDSRLEDFIEDKGSISPQDAAINANLAKQTQRVLSTLDKREEKILRMRFGIGEKHDHTLEEVGQDFNVTRERIRQIEEKALRKLKHPSRAEKLRSFIEY*