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PLM4_90_b2_sep16_scaffold_6389_1

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(1..498)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LU56_HALO1 similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 173.0
  • Bit_score: 144
  • Evalue 6.90e-32
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 173.0
  • Bit_score: 144
  • Evalue 2.00e-32
Tax=RBG_13_Deltaproteobacteria_47_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 166.0
  • Bit_score: 238
  • Evalue 6.40e-60

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Taxonomy

RBG_13_Deltaproteobacteria_47_9_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
GTGAATCATGACGAAACGGAACTGATCTCCCGATGCCAAAAAGGGGATGCGGACGCATTGAAGGAGATCTTCGATCAATATCATAAGAAGGTATACCGGATCGCCTATGGAGTGGTGAGACAAACGGAGGAGGCCCTCGATATCGTTCAAGAAGTATTCATTAAATTGTATCGCTCCATCCGGTTTTTTAAAGGGCAATCAAAATTTTATACCTATCTTTATCGAATGACAATGAATACTGCGATTGACCATGCACGGGAGATGAGAAGAGCTCCTTTTTCAAGCCTTGATGGGATGGAAGGATTCCAACCCTCAGATGGAGTTGAAAAAAGACCGGATAGCATTCTCCTCCATAAGGAATTAGAAGAAAAGGTTAAGAGAGTTCTGGAGAAACTCCCTAATGATCAGAGAATGGCCTTGATCTTCAGAGAGATAGAGGGACTCTCCTACCAGGAGATATCAGAAACCATGGGATGTTCCATTGGGACAGTGATGTCA
PROTEIN sequence
Length: 166
VNHDETELISRCQKGDADALKEIFDQYHKKVYRIAYGVVRQTEEALDIVQEVFIKLYRSIRFFKGQSKFYTYLYRMTMNTAIDHAREMRRAPFSSLDGMEGFQPSDGVEKRPDSILLHKELEEKVKRVLEKLPNDQRMALIFREIEGLSYQEISETMGCSIGTVMS