ggKbase home page

PLM4_90_b2_sep16_scaffold_6725_4

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(3608..4261)

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 215.0
  • Bit_score: 182
  • Evalue 3.00e-43
type I secretion outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 218.0
  • Bit_score: 170
  • Evalue 3.30e-40
Tax=RBG_16_Deltaproteobacteria_49_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 217.0
  • Bit_score: 327
  • Evalue 1.10e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_49_23_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
AATACATTGCTCAGAAGGGAGATCGATACTTCCTTGCGTGTCGTCGATATTCTTGAATACAAACCATTTTCACTCCGATTCGAAGAGTCTCTTGAGGAGGCATTGCAGAAGAGACCTGAGATTACGACCGCAGAGTTGAATATCGACCAAGCAAAGGAGAACGTCAAGATAGCCCGAAGCGGATTTTTCCCCACGATTAATCTTACAGGGAACTATGGCCGCACCTCTGAAGAAGTCGGGCTCATGGGGGATCTTCGAAGCGAAAAGTGGACCGTTCAGGCCTTAGCTACATTTACCTTATGGGATTGGAAGAAAACAGCTTCCAAAGTGGGAGAGAACAAGGTGAAGGTTACTCAGACTGAGGATTCGAAAGTTCAGTTGGTAGAAGGGGTGACCTTGGAAGTGAAGCAAGACTATCTGAATATGTTGCAAGCGGAGAAGAGCATAGGAGTCGCAGAGAAGGCTATTGAACAGGCAGAAGAGAACTTAAGGATGAATGAGGAGCGATATAAATATCAGGTAGCCACTGCCACCGATGTTCTTGATGCCGTAACATTACTGGCTCAAATCAGGGTGAATTACTATAGTAGTCTGAGCGATTTCAATATCGCTAAGGCCAGATTGGAACGGGCCATGGGAAGGATGTACCCGTAA
PROTEIN sequence
Length: 218
NTLLRREIDTSLRVVDILEYKPFSLRFEESLEEALQKRPEITTAELNIDQAKENVKIARSGFFPTINLTGNYGRTSEEVGLMGDLRSEKWTVQALATFTLWDWKKTASKVGENKVKVTQTEDSKVQLVEGVTLEVKQDYLNMLQAEKSIGVAEKAIEQAEENLRMNEERYKYQVATATDVLDAVTLLAQIRVNYYSSLSDFNIAKARLERAMGRMYP*