ggKbase home page

PLM4_90_b2_sep16_scaffold_9259_6

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 3359..5608

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamA bin=GWA2_OP3_52_12 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 696.0
  • Bit_score: 479
  • Evalue 5.40e-132
membrane protein similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 727.0
  • Bit_score: 473
  • Evalue 1.10e-130
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 733.0
  • Bit_score: 1102
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2250
ATGATTACAAGACGAATAGGACTTGCGCTCCTTGTTTTTACTCTTCTTATGGGGGTATGTGCCGGAGCAGACGAAAACATTTATAAAATCATGATTCTTGGAAATGTGAAGGTCGAAGAAGGAGTCGTTCGAGGAGCGATCAAGAGCCAGGAGGGCGGTCCCTTTTCTGCCGAAAGGATTCGCGAAGATTTGCGATCCATTTTCGACTTGGGTTTTTTTACCGACGTGCAAGTCGATATCAAATTGACCCCCCAGGGCAAAGAAGTGATCTTCATTGTCGTTGAAAAACCCTCGATCAAAGAGATCTTGATCAAGGGAAATCAAAAGGTGAAATTGGATGATATTAAAGAAAAGATGACGCTCACCCCGCGCTCCATCCTCAACCTTGAAAAGGTGAAAGAGGACTCGGAACAGATCCGGAAGCTCTATTTTTCCAAAGGCTATTATGGGGTCAAGGTGGAATACAAAGTGGATTATTTGGAAACCAACGAAGCGATCATCACTTTCACTATTTCTGAAGGCCCCAAGGGACATATCCAAAAAATAGTATTTAAAGGGAACAAGAAAATCAAAACCTCTCAATTGAAGAAGGTGATCATGACCAAACAGAGGAATATCTATTCCTTCATCACCAAGACTGGGATCCTGGATGAAGATATTCTAAAAAATGATATTCAACTCCTGGGGGCCTACTATGCTGATCATGGGTATCTCGAGGCAAAGATCTCCGAACCCAAGATGGATCTCTCCAACCCCAAAAAGATTCAAATTGAGATTGAGATCGTAGAAGGGCCTCAATATCATATTGGGATCATCGACTTCAAGGGCGATCTCCTCACGGACAAAGAGGATCTTTTTAAAACCCTCAAATTGAAACGGGACGATGTCTATAGCAACACAGTTATTCGAAAAGAGGTGAATGCCCTTACCGAAAAGTTTGCCAATCAAGGCTTTGCCTATGTAGAGATCACTCCCGATACCTCAGTGGATCCTAAAACCCTTTTAGTCCATCTCACCTTTGACATCGAAAAAAAGAAACGAGTCTCTTTTGAAAAGATCCAGATTGCCGGGAACACAAAGACGCGTGACAAGGTGATTCGCAGGGAAATCCAGATGGCCGAAGGGGAACTTTACAGCGTTACCAAAATGAATAAAAGCCGGGACCGACTTAAAAGGACAGGTTTCTTTAAAGAGGTGGACTTCGCCACCAGTCGCGGGAGCACTGAAGAAAAAATCAACCTCGATATCAAAGTCGAAGAGGCTCCTACAGGTGCCATTAGTTTCGGAGTGGGGTATAGTTCTATTGAAAGCATAATAGGCACTGCCTCCATCTCAGAACGCAATCTTTTCGGTTATGGATATCAGGGAGTGTTGAGTTTCAGCCTGGGATCCCAAACCCAAAATTTTAAGCTCGGCTTTACGGATCCCTATTTTTTAGGATACCCCTTTTCAGCAGGCATCAACCTCTACCACGAAAATATAGAGATCTCTAACGATTATTCCTATAAAATTGCTGGAGGGACGATTAATTTTGGAAAGGAATTGACTGAAAAGATTCGAATGGATGCGAAGTATAAATTAGAGAGCATCAAGGTTTATGATGTGGCAACGGGTGCCTCTACCTATATCCAAGAGCAGAGAGGGAAGAAGACCACCAGCGCCATTTCTATTGCTCCCTCTATGGACACCCGTGACGACTACTATAACCCGCGACGAGGAGGCCGACACAGCTTTTCCATTCAAAACGCTGGGGGGATTTTAGGAGGAGACAATTATTTTGTTAAAGTCTTAGGAGAGACCAGTTGGTTCTTTCCATTGCCTTTAAACACAACCTTCAACCTTCATGCGAAGGGAGGAGTGGTCGTGCCTTATGGAGGTAAAATTGATGTTCCGGAGAGAATTGAAGACCCAGATAATCCAGGTAGTTTTAAATATGTCCTCAACGAAAAAGATAGACTCCCCATCTATGAAAAATTCTTTGTCGGCGGACTTAACACCATACGAGGATTCGAATATGGGATGGCCGGTCCTCTCGATCGAAACAGAGAGCCGGTGGGGGCTGAGAGGATGATAGTCTTTAATTCTGAGTTTATTTTCCCTTTGTCCCGTGAGATTGGTTTGAGGGGCGCCCTATTCTGGGACATTGGGAAGGCCTGGGGAGTTGGGGACGAAAGAACTTATACTTTACTGGAAAAAGATTGGGATAATGATGGAGATAAGGAAAAAAAACCGGTAAAAAATATTGAGAAG
PROTEIN sequence
Length: 750
MITRRIGLALLVFTLLMGVCAGADENIYKIMILGNVKVEEGVVRGAIKSQEGGPFSAERIREDLRSIFDLGFFTDVQVDIKLTPQGKEVIFIVVEKPSIKEILIKGNQKVKLDDIKEKMTLTPRSILNLEKVKEDSEQIRKLYFSKGYYGVKVEYKVDYLETNEAIITFTISEGPKGHIQKIVFKGNKKIKTSQLKKVIMTKQRNIYSFITKTGILDEDILKNDIQLLGAYYADHGYLEAKISEPKMDLSNPKKIQIEIEIVEGPQYHIGIIDFKGDLLTDKEDLFKTLKLKRDDVYSNTVIRKEVNALTEKFANQGFAYVEITPDTSVDPKTLLVHLTFDIEKKKRVSFEKIQIAGNTKTRDKVIRREIQMAEGELYSVTKMNKSRDRLKRTGFFKEVDFATSRGSTEEKINLDIKVEEAPTGAISFGVGYSSIESIIGTASISERNLFGYGYQGVLSFSLGSQTQNFKLGFTDPYFLGYPFSAGINLYHENIEISNDYSYKIAGGTINFGKELTEKIRMDAKYKLESIKVYDVATGASTYIQEQRGKKTTSAISIAPSMDTRDDYYNPRRGGRHSFSIQNAGGILGGDNYFVKVLGETSWFFPLPLNTTFNLHAKGGVVVPYGGKIDVPERIEDPDNPGSFKYVLNEKDRLPIYEKFFVGGLNTIRGFEYGMAGPLDRNREPVGAERMIVFNSEFIFPLSREIGLRGALFWDIGKAWGVGDERTYTLLEKDWDNDGDKEKKPVKNIEK