ggKbase home page

PLM4_90_b2_sep16_scaffold_11113_1

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 1..234

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion system ABC transporter, HlyB family Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LCI0_RUMC1 similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 72.0
  • Bit_score: 93
  • Evalue 6.50e-17
peptidase C39 similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 74.0
  • Bit_score: 97
  • Evalue 9.70e-19
Tax=RBG_16_Chloroflexi_56_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 72.0
  • Bit_score: 100
  • Evalue 9.70e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_56_8_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 234
TCTTCTTTAGATTCGGAATCCGAAGCCATCATCCAGAGGAACCTGAGGCAGATCTGCCGGGGAAGAACAGTCATACTCATCGCCCACAGGCTCTCCACACTGAGGATTGCTGAAAGAATTATTGTGTTAGAGAGGGGAGAAATCCTCGAGTCAGGAACTCATGAAGAGCTGATGGTCCAAAAGGGACTCTATCATCACCTTCAACTTCAACAGAATTTGGAGTTAAGGACATAA
PROTEIN sequence
Length: 78
SSLDSESEAIIQRNLRQICRGRTVILIAHRLSTLRIAERIIVLERGEILESGTHEELMVQKGLYHHLQLQQNLELRT*