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PLM4_90_b2_sep16_scaffold_23913_3

Organism: PLM4_90_b2_sep16_Deltaproteobacteria_46_9

near complete RP 40 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(1339..1701)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport periplasmic protein LptA bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 120.0
  • Bit_score: 94
  • Evalue 5.90e-17
lptA; lipopolysaccharide ABC transporter periplasmic protein LptA similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 111.0
  • Bit_score: 93
  • Evalue 3.70e-17
Tax=RBG_16_Deltaproteobacteria_48_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 120.0
  • Bit_score: 216
  • Evalue 1.10e-53

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Taxonomy

RBG_16_Deltaproteobacteria_48_10_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
GTGGTAGCCAAACAGGAGGACATGACGCTCTATGCCAATACACTCGTTGTCATTTACGACCCAGACACGAGAAAACTGAAGAAGATTGTAGCGATTGGCAATGTGAAGGTTATCCAATTGGATCGCCGGGCAACCGGCCAGAAGGCAACTTTTGATCAGGATGAGAATAAGGTGGTTCTGGATGGGGACGCTGTGGTCCGTGAAGGAGCGAATGTCATCAGGGGGGAGCGAATCACCTTCTATGTCGAGGAGGAGAGGAGCGTTGTAGAACCGGGAAAAGGGGGGCGTGTCAGCACCAGCATTACTCCACCTCCCAAAGAGGAGGGGGAAGAGAAAAAGCCGAAAGAAGGAAGGAAGAAATAG
PROTEIN sequence
Length: 121
VVAKQEDMTLYANTLVVIYDPDTRKLKKIVAIGNVKVIQLDRRATGQKATFDQDENKVVLDGDAVVREGANVIRGERITFYVEEERSVVEPGKGGRVSTSITPPPKEEGEEKKPKEGRKK*