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PLM4_90_coex_sep16_scaffold_641_5

Organism: PLM4_90_coex_sep16_Deltaproteobacteria_55_11

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 5243..6916

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E612_GEOLS similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 577.0
  • Bit_score: 626
  • Evalue 1.50e-176
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 577.0
  • Bit_score: 626
  • Evalue 4.40e-177
Tax=RBG_13_Deltaproteobacteria_52_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 557.0
  • Bit_score: 954
  • Evalue 5.90e-275

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Taxonomy

RBG_13_Deltaproteobacteria_52_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1674
TTGAAGGATAAAGGAGTTTTAGATTTTGAAGAAGTTGATGAGGTCGTAAACTCAGATGAAGTCCCCGCTGAGCAGCTGGAAGACATGTTGACGATGTTCAACGAGATAGACATCGAAATGACCGATGAAGAAGAGGGGGTGAGCGCGCAGAAGGTAGGGGAAGAGTTTGTCGAAGAGGAACGAGTAGAAGAGATTGAAGATATCGATCTCATCGGCAGGACCAGTGACCCCGTGCGGTTGTACCTCCGGGAGATGGGTCGGGTCTCCCTCTTAACCAGAGAAGGAGAAGTAGCCATCGCCAAGAGAATAGAGGAGGGGAAAAAAGAGGTCATCAGGGTCATTCTTAACTGTCCTCTTACGGTAAGAGAGGTATTGAACATCGGAGAAGGAATCCGCCAGGGGGACATAGATATCAGGAACGTTACCACCGAGGTTGAGGATGACGAAGGTTACGCCGAGGAGAAGGAGTTTTACAAAAATAAAATCCTGAGGATCATTGGACGGATTCAACGCCTTGATGACGAGATCAAAAAATTGAAAGAAAAGGGCGAGGCTGGTGAGGAAAAGCTGCAGAAGAAAAGGGAAGAGATGATAACGCTCCTCACCCAGATAAACCTCAAAGAACTTCAAATCGAGGCCATCGTAGATAAATTGAGGGGGTTGGTCCGCCGCATCGAGAAGGTGGAGGAGGAACTCGCGGCGGTGGGCAAGAGGCTCGGAGTGCCGGTACAGAAGTTGAGATCATTCCTTCGCGAGGTAAAGAAGGATCCGGCGAAAAAGAAGGCCTTCTTCAAACAGAAAAGACTAAACGAAGAGGGATTTGTGGAGCTGTCGAAGGGTGTGAGGAACGCCTATCGAAAGATCCAACGGATCGAGCAGGAGGCAGGGCTTTATACGCTGGAGCTGAAAAAGGCCATTGACGGCATCCGTCGCGGGGAGACCATGGCCAAAGAGGCAAAAAATGAATTAGTGAGGGCCAACCTGCGGTTGGTGGTGAGCATCGCCAAGAAATACACCAACCGGGGGCTTCAATTTCTCGATCTTATCCAAGAGGGTAATATCGGTCTCATGAAGGCCGTGGATAAGTTTGAGTATGCCCGAGGTTACAAATTCAGCACCTATGCCACGTGGTGGATTAGACAGGCCATCACGAGGGCAATAGCCGATCAGGCTAGGACCATTAGGATACCGGTTCACATGATCGAGACTATCAACAAGTTGATCAGAACATCGCGCTATCTCGTCCAAGAATTGGGGAGAGAGCCTCACCCCGAGGAGATCGCCGAGAGGATGGAGCTGCCCGTGGACAAGGTTCGCAAGATCCTCAAGATAGCCAAGGAACCCATCTCGCTGGAGACCCCCATCGGGGAGGATGAAGATAGCCATTTGGGTGACTTCATCGAGGACAAAAAGGCCGTGCAACCAGGTGAAGCCATTATCGCCAAAAATCTGGTGGAGCAGCTCCAGAAGGTCCTGACCACCCTTACCCCGCGGGAGGAGAAGGTCTTGCGGATGAGATTTGGCATCGGCGAAAAATACGATCACACCCTGGAGGAAGTGGGGCAGGATTTCTCCGTCACCAGGGAGCGAATCCGCCAGATCGAGGCCAAATCCTTGCGCAAGCTACGCCACCCCAGCAGGAGCAAACAGCTGAAGAGTTTTATCGATAATTAA
PROTEIN sequence
Length: 558
LKDKGVLDFEEVDEVVNSDEVPAEQLEDMLTMFNEIDIEMTDEEEGVSAQKVGEEFVEEERVEEIEDIDLIGRTSDPVRLYLREMGRVSLLTREGEVAIAKRIEEGKKEVIRVILNCPLTVREVLNIGEGIRQGDIDIRNVTTEVEDDEGYAEEKEFYKNKILRIIGRIQRLDDEIKKLKEKGEAGEEKLQKKREEMITLLTQINLKELQIEAIVDKLRGLVRRIEKVEEELAAVGKRLGVPVQKLRSFLREVKKDPAKKKAFFKQKRLNEEGFVELSKGVRNAYRKIQRIEQEAGLYTLELKKAIDGIRRGETMAKEAKNELVRANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYARGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQELGREPHPEEIAERMELPVDKVRKILKIAKEPISLETPIGEDEDSHLGDFIEDKKAVQPGEAIIAKNLVEQLQKVLTTLTPREEKVLRMRFGIGEKYDHTLEEVGQDFSVTRERIRQIEAKSLRKLRHPSRSKQLKSFIDN*