ggKbase home page

PLM4_90_coex_sep16_scaffold_48195_3

Organism: PLM4_90_coex_sep16_Deltaproteobacteria_65_7

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 MC: 4 ASCG 10 / 38
Location: comp(1036..1227)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit bin=GWA2_Deltaproteo_65_63 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 60.0
  • Bit_score: 71
  • Evalue 2.20e-10
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 57.0
  • Bit_score: 52
  • Evalue 5.00e-05
Tax=RBG_16_Deltaproteobacteria_64_85_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 63.0
  • Bit_score: 87
  • Evalue 4.10e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_64_85_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 192
CGCGTCTACCTGGTCGGCAAGGACGGTAAGCCCAAGACGGTCCCCGTCAAGATCGGGATAAGCGACGGGTCCTTCACCCATCTGGTCGAGGGAGACCTCCGCGAGGGTGACGCCTTGATCACTTCCGAGACGGTCAAGAAAAAGAGCGCGAACAGTTCCGGCAGTCCCCCGGGAATGGGAGGCTTCCGATAA
PROTEIN sequence
Length: 64
RVYLVGKDGKPKTVPVKIGISDGSFTHLVEGDLREGDALITSETVKKKSANSSGSPPGMGGFR*