ggKbase home page

PLM4_5_b1_sep16_scaffold_290_14

Organism: PLM4_5_b1_sep16_Betaproteobacteria_67_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 10623..12572

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P7C5_AROAE similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 623.0
  • Bit_score: 814
  • Evalue 6.10e-233
vacB; exoribonuclease R similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 623.0
  • Bit_score: 814
  • Evalue 1.70e-233
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 618.0
  • Bit_score: 997
  • Evalue 5.40e-288

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Betaproteobacteria_68_20 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1950
GTGTCAAAAAAACGCCGCACTGAAACGCGCCCCCGGCGCAGCGAACCGCGGCCCGGCCGCAGCGCAACGCCGCCCCCCGCATTCGGCAAGTTCACCGGCCGGGTGGAAGGCCATCCCGACGGCCACGGTTTCCTGGTTCCCGACGGCGGCGCGGCGCGCGTGTTCCTCTCCGCCGCCGAGATGCGCCAGGTGCTGCACGGCGACCGCGCTGTGGTGCGCGTGACCGGCATCGATCATCGCGAGCGCCCGGCGGGAGAGATTCTCGAGGTGCTCGAACGCGTCAACCGGCGCATCGTCGGCCGCCTGCACAGCGAGCACGGCGTGTTGTTCCTGGTGCCGGAGGATAGGCGCATCGCGCAGGACATCCTCGTGCCTCCGGCGGACGCCGGGCGCGCCAAGGCCGGACAGGTCGTGACCGTCGAGCTGGTGGCGCAGCCCTCCAAGCATGCGCAGCCGATCGGCCGCGTCGCCGAGGTGCTGGGCAACTATGCCGACCCCGGCATGGAAATCGAGATCGCGCTGCGCAAGTTCGACCTGCCGCACGCGTTCTCCAGGAACGCCGAAGCGCAGGCGCGCGCTTATCCCGAGACGGTGCGAGAGGAGGACACCAAGGGCCGGCGCGACCTGCGCGAGTTCAACTTCGTCACCATCGACGGCGAGACGGCGAAGGACTTTGACGACGCGGTTTACGCCGTGCGGGAAGGCAAGGGATTCCGCCTGTGGGTGGCGATCGCCGACGTCAGCCACTACGTGCGCGACGGCGATGCGCTGGACCAGGATGCGCGCGCGCGCGGCACCTCGGTGTACTTCCCGCGCCGCGTGCTGCCGATGCTGCCGGAAAAGCTCTCCAACGGCCTGTGCTCGCTCAACCCGGAAGTCGACCGGCTGGCGATGGTGTGCGAAATGGCGATCACCCCGGCGGGCACGGTGGCGCGCTACGAGTTCTACCCGGCGGTGTTCCGCTCGCACGCGCGCCTGACCTACACCGAGGTGTGGGCCAAGCTCTCCGCGGGCAAGGCGCCGGCGCACCTGGCCACGCTGTACGAACTGTTCAAGGCGCTGTACGCGGCGCGCGGCCAGCGCGGCGCGATCGATTTCGAGACCGTGGAAACGAGGATGGAGTTCGACGCGCTGGGCAAGATCAAGCGCATCTATCCCGAGGCACGCAACGACGCGCACCGCGTGATCGAGGAGTGCATGCTCGCGGCCAACGTCTGCGCCGGCGAGTTCCTCGCCGCTCGCGGCCAGCCGGCGCTGTACCGCGTGCACGACGTGCCCTCGGCGGACCGGGTCGGCGCGCTGCGCGAATTCCTCGCCGAGCTGGGGCTCTCGCTGCCCGGCGGCGACAAGCCCAAACCCAAGGACTACGCGCAGCTCATCGAACGCATCAAATCGCGGCCCGATTTTGCGCTGCTGCAGACGATCCTGCTGCGCTCGCTCAAGCAGGCCGTCTACACACCGGAGAACCTCGGCCACTTCGGCCTCGCCTTCGACGCCTACGTGCACTTCACCTCGCCGATCCGGCGCTATCCCGACCTGCTCACGCACCGCGGCATCAAGGCGGCGTTGGCGAACCGGCGCTATGAGGGCGTGGACTGGGACGAACTGGGGCGGCACTGCTCGGAGACCGAGCGGCGCGCCGACGACGCCAGCCGCGACGTGGAGAGCTGGCTCAAGTGCCACTACATGCAGGACCAGGTGGGCAACGTGTTCAGTGGCGTGATCTCCGGAGTGACGCCCTTCGGCCTGTTCGTCACGCTGGACGAATACTTCGTCGACGGCCTGGTGCACATCTCCGAGCTGGGGCGCGACTATTTTCAGTTCGACGCCGCGCGCCACATGTTGATGGGCGATCGCACGAAGAAGCGCTACCGGCTCGCCGACCGCATGAAGGTGAAGCTGGTGCGCGTGGACCTCGATAGCCGCAAGATCGACTTTGTGCCGGCGTGA
PROTEIN sequence
Length: 650
VSKKRRTETRPRRSEPRPGRSATPPPAFGKFTGRVEGHPDGHGFLVPDGGAARVFLSAAEMRQVLHGDRAVVRVTGIDHRERPAGEILEVLERVNRRIVGRLHSEHGVLFLVPEDRRIAQDILVPPADAGRAKAGQVVTVELVAQPSKHAQPIGRVAEVLGNYADPGMEIEIALRKFDLPHAFSRNAEAQARAYPETVREEDTKGRRDLREFNFVTIDGETAKDFDDAVYAVREGKGFRLWVAIADVSHYVRDGDALDQDARARGTSVYFPRRVLPMLPEKLSNGLCSLNPEVDRLAMVCEMAITPAGTVARYEFYPAVFRSHARLTYTEVWAKLSAGKAPAHLATLYELFKALYAARGQRGAIDFETVETRMEFDALGKIKRIYPEARNDAHRVIEECMLAANVCAGEFLAARGQPALYRVHDVPSADRVGALREFLAELGLSLPGGDKPKPKDYAQLIERIKSRPDFALLQTILLRSLKQAVYTPENLGHFGLAFDAYVHFTSPIRRYPDLLTHRGIKAALANRRYEGVDWDELGRHCSETERRADDASRDVESWLKCHYMQDQVGNVFSGVISGVTPFGLFVTLDEYFVDGLVHISELGRDYFQFDAARHMLMGDRTKKRYRLADRMKVKLVRVDLDSRKIDFVPA*