ggKbase home page

PLM4_5_b1_sep16_scaffold_17109_2

Organism: PLM4_5_b1_sep16_Betaproteobacteria_67_16

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(1312..2496)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein Tax=Variovorax paradoxus RepID=UPI00037C0479 similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 387.0
  • Bit_score: 541
  • Evalue 6.00e-151
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 387.0
  • Bit_score: 540
  • Evalue 3.80e-151
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 393.0
  • Bit_score: 674
  • Evalue 8.40e-191

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_66_14 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
ATGAAGCTCAGATTGGTATTGGGAATTGCCGCGGCGCTGGCGGCGCTCGGCGCGCAGGCGCAGACCATCAGGATCGGCGAGTTGAACAGCTACAAGGTGTTCCCCGCCTTCCTCGAGCCCTACAAGAAGGGCTGGGAGCTCGCGCTGGAGGAAATCAACAAGGCGGGCGGCGCCAACGGCCGCAAGCTGGAAGTGATCTCGCGCGACGACAACGGCAACCCGGGGGACGCGGTGCGTGTCGCCGAGGAACTGCTGTCGCGCGAGAACGCGGGCGTCCTGATGGGCACCTTCGCCTCGCACGTCGGCCTCGCCGTGTCCAACCTTGCCAACCAGAGGAAGGTGGTGTTCGTCGCCGCCGAGCCGCTCACCGACAAGATCGTTTGGGAGAACGGCAACCGCTACACCTTCCGCCTGCGCCCCTCGACCTACATGCAGGTGGCGATGCTGGTGCCGGAGGCCGCCAAGCTGAAGAAAGTTCGCTGGGCCATCGTCTACCCGAACTACGAGTACGGGCAGTCCGCCACCGCCTCGTTCAAGAAGCTGCTCTCGAAAGCGCAGCCCGGCGCGCAGTTCGTCGCCGAGCAGGCGCCGGCGCTGGGCAAGATCGAGGCCGGCTCGGTGGTGCAGGCGCTGATGGACGCCAAGCCCGACGCGATCTTCAGTTCGCTCTTCGGCGCCGACCTGCAGAAGTTCGTGCGCGAGGGCAACACGCGCGGGCTGTTCAAGAACATGACCGTGTTCAACCTGCTCGCCGGCGAGCCCGAGTACCTCGATCCGCTCAAGGACGAGACTCCGGATGGCTGGTGGGTCACCGGCTACCCCTGGAACGAGATCAAGACGCCGGCGCACCAGAAATTCCTTGCCGCCTACCGCGCGAAATGGAAGGACTACCCGCGCCTGGGTTCGGTGGTGGGCTACTCGACGATGTACACGGTCGCCAACGGCATCCGCAGGGCCGGCGGCACCGACCCCGAGAAACTGATCGCCGCGCTCAAGGGCATGGAGATGGACACGCCGATCGGGCCGATCGTTTACCGCGCGGTGGACCACCAGTCCACCATGGGCGCCTACGTGGGCCAGCTGGCGAAGAAGAAAGGCGTCGGCACGATGGTCAACTGGCGCTTCGCCGACGGCGCGAATTTCCTGCCGCCGTTCGAGGAAGTGCGCGCGATGCGCAAGGATTAG
PROTEIN sequence
Length: 395
MKLRLVLGIAAALAALGAQAQTIRIGELNSYKVFPAFLEPYKKGWELALEEINKAGGANGRKLEVISRDDNGNPGDAVRVAEELLSRENAGVLMGTFASHVGLAVSNLANQRKVVFVAAEPLTDKIVWENGNRYTFRLRPSTYMQVAMLVPEAAKLKKVRWAIVYPNYEYGQSATASFKKLLSKAQPGAQFVAEQAPALGKIEAGSVVQALMDAKPDAIFSSLFGADLQKFVREGNTRGLFKNMTVFNLLAGEPEYLDPLKDETPDGWWVTGYPWNEIKTPAHQKFLAAYRAKWKDYPRLGSVVGYSTMYTVANGIRRAGGTDPEKLIAALKGMEMDTPIGPIVYRAVDHQSTMGAYVGQLAKKKGVGTMVNWRFADGANFLPPFEEVRAMRKD*