ggKbase home page

PLM4_5_b1_sep16_scaffold_4358_4

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: 2762..3928

Top 3 Functional Annotations

Value Algorithm Source
ABC-type antimicrobial peptide transport system,permease component Tax=Nitrosospira sp. APG3 RepID=M5DM84_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 388.0
  • Bit_score: 564
  • Evalue 5.00e-158
Multidrug ABC transporter permease {ECO:0000313|EMBL:KIO49392.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 388.0
  • Bit_score: 569
  • Evalue 2.20e-159
ABC transporter membrane protein similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 388.0
  • Bit_score: 530
  • Evalue 3.00e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGAAAATCCCGTTTTCTTACACACTGCGCAACCTGTGGGCGCGCAAGCTGACGACGGTGTTGACGGCCGGCGGCATGGCGCTCGTGGTGTTCGTTTTTGCGACGGTGCTGATGCTGGAGGAGGGACTGCGCAAAACGCTGGTCGAAACGGGGTCGTACGACAATGTGGTAGTGATCCGGCGCTCGGCGCAGACCGAGGTGCAGAGCGCGATCGACCGCGTGCAGGCCGCGTTGATCGAAAGCCAGCCGGAGGTGGCGTTCGGCGCGGACGGCGAGCGCATGGTCTCCAAAGAAACAATCGTGCTGGTCAATCTCAACAAGCGCGACTCGGACAAGCCGACCAACGTCATGGTGCGCGGCGTCGCGCCGCGGGGACTGGCGTTGCGGCCGCAGGTCAAAATTACCGCCGGGCGCATGTTTCGTCCGGGCTCATCCGAGATCGTCGCGGGCCGCAACGCGGCGGAGCGCTTCAAGGGGGCGGGTATCGGCGAAACCCTGTGGTTCGGCCAGCGCGAATGGCGGATCGTCGGCACTTTCGACGCGGGCAAGAGCGGCTTCGACTCCGAAATCTGGGGCGACGCCGACCAGTTGATGCAGGCCTTCCGGCGGCCGATCTATTCGGCATTGCTCGTCAAGCTCAATGATCCGGCCCGGTTCAACGAATTGAAGACGCGCCTGGAAAGCGACCAGCGGCTGACCGTCGAAGCCAAGCGCGAGACGATTTTTTACGCGGACCAATCCGAGGTGCTCGCGAACTTCATCCGCTATCTTGGCCTTACGCTCTCCATCATATTCTCGGTGGGCGCAATCATCGGCGCGATGATTACAATGTACGCATCAGTCGCCAGCCGCACCGCCGAAATAGGCACCCTGCGCGCGCTGGGTTTCCGCCAGCGCAGTGTGATGGCCGCTTTCATGTTCGAGGCGATCCTGCTGGGACTGGTCGGCGGGTGCGTGGGCTTGTTCCTGGCGTCGTTCATGCAGTTTTTTACGATCTCGACCATGAACTGGCAATCGTTTTCCGAACTCGCGTTCAGCTTCACCCTGACGCCCGGCATTACGCTGAAGACGCTGGCTTTTGCGCTGATAATGGGCGTGGTCGGCGGCTTCCTGCCGGCGATGCGCGCGGCGAAACTGCCGATCATCGACGCCTTGCGCGCGGCCTGA
PROTEIN sequence
Length: 389
MKIPFSYTLRNLWARKLTTVLTAGGMALVVFVFATVLMLEEGLRKTLVETGSYDNVVVIRRSAQTEVQSAIDRVQAALIESQPEVAFGADGERMVSKETIVLVNLNKRDSDKPTNVMVRGVAPRGLALRPQVKITAGRMFRPGSSEIVAGRNAAERFKGAGIGETLWFGQREWRIVGTFDAGKSGFDSEIWGDADQLMQAFRRPIYSALLVKLNDPARFNELKTRLESDQRLTVEAKRETIFYADQSEVLANFIRYLGLTLSIIFSVGAIIGAMITMYASVASRTAEIGTLRALGFRQRSVMAAFMFEAILLGLVGGCVGLFLASFMQFFTISTMNWQSFSELAFSFTLTPGITLKTLAFALIMGVVGGFLPAMRAAKLPIIDALRAA*