ggKbase home page

PLM4_5_b1_sep16_scaffold_34192_2

Organism: PLM4_5_b1_sep16_Nitrosospira_multiformis_62_13

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(101..988)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 281.0
  • Bit_score: 293
  • Evalue 2.10e-76
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 278.0
  • Bit_score: 243
  • Evalue 5.50e-62
Tax=CSP1_6_Rokubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 281.0
  • Bit_score: 293
  • Evalue 3.00e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGGCATCACGTCACCTGGATTTTGTCGACTCAGACTACAATTACGGCCCGTTCCGGCAGGGCATGCGCGAACTCGGCTATGTCGAAGGCAAGAACTTGATCATCGAATGGCGCTCTGCCGAAGGAAAGTCCGAGCGACTTTCAGGTCTTGCAACCGAGTTGGTAAATCTCAAAGTGGACGTTATCGTGGCAGCGGGCACGCCCGCAACCAGTGCGGCGCAGAAAGCCACCGCGACGATTCCGATTGTCATGGGCAGCGTCGCCGACCCGGTCGTCAACGGATTCGTAAAGAGCCTGCGACAACCTGCGGGCAACATTACCGGTTTGGCGAACATGTCCGAAGACGTGAGTCCGAAGCAGCTTGAGATGCTGCTTGCCATGGTGCCCAAGCTGTCACGCGTGGCTCTCCTCGTGAACCCATCCAACCCGGCCAATGTGAAAAGCGTGGAGATAGTCCAGTCCGCAGGACACAAGCTTGGCGTAAAGATTCTGCGTGCGGACGCGCGGACTCCCCAGGAAATTGACGACGCTTTCTCCTGGATACGCCAGCAGAACGCCGGTGCGCTGATGATGTGGACGGAGCCGTTTTTCCTGCAACAAAAAAACCAGATTGCGGAATTGGCCGTGAAACATCGGCTACCAGCGATGGCCGGGGATCGGATTTATTCAGAGGCTGGCGCTCTGATGAGTTACGGCCCGAACATTGCCGACCAGTACCGGCGCTCGGCAACGTATGTGGACAGGATTCTCAAGGGCGCTAAACCTGCGGAACTGCCAGTGGAGCAACCTACAAAATTTTATTTGGTGATCAACCGCAATACCGCCAGGGCGTTGGGCCTCACGATCCCGCAAACGCTACTGTTAAGCGCCGACAAGGTGATCGAGTAG
PROTEIN sequence
Length: 296
MASRHLDFVDSDYNYGPFRQGMRELGYVEGKNLIIEWRSAEGKSERLSGLATELVNLKVDVIVAAGTPATSAAQKATATIPIVMGSVADPVVNGFVKSLRQPAGNITGLANMSEDVSPKQLEMLLAMVPKLSRVALLVNPSNPANVKSVEIVQSAGHKLGVKILRADARTPQEIDDAFSWIRQQNAGALMMWTEPFFLQQKNQIAELAVKHRLPAMAGDRIYSEAGALMSYGPNIADQYRRSATYVDRILKGAKPAELPVEQPTKFYLVINRNTARALGLTIPQTLLLSADKVIE*